RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 DLG2Q15700 870 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 EOGTQ5NDL2 527 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 DCAF12L1Q5VU92 463 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 SDE2Q6IQ49 451 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 REXO1L1PQ8IX06 675 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 SH2D3CQ8N5H7 860 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.13□□□□□ -0.47
APTX-227ENST00000485479 PLD5Q8N7P1 536 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 FAM71BQ8TC56 605 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 PTPRN2Q92932 1015 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 GABRG3Q99928 467 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 PRSS16Q9NQE7 514 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 LCMT1Q9UIC8 334 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 AMFRQ9UKV5 643 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 MUC6Q6W4X9 2439 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 TTC24A2A3L6 582 aaPredicted RBP12.12□□□□□ -0.47
APTX-227ENST00000485479 PLK4O00444 970 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 ENC1O14682 589 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 SYNCRIPO60506 623 aaKnown RBP12.12□□□□□ -0.47
APTX-227ENST00000485479 ATG13O75143 517 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 PYGMP11217 842 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 TDGF1P13385 188 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 CDKN2BP42772 138 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 COPAP53621 1224 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 ENPP2Q13822 863 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 PDK2Q15119 407 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 KCTD19Q17RG1 926 aaPredicted RBP12.12□□□□□ -0.47
APTX-227ENST00000485479 ATXN7L2Q5T6C5 722 aaPredicted RBP12.12□□□□□ -0.47
APTX-227ENST00000485479 KIAA1324Q6UXG2 1013 aaKnown RBP12.12□□□□□ -0.47
APTX-227ENST00000485479 SPOCD1Q6ZMY3 1216 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 MAP7D3Q8IWC1 876 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 STK40Q8N2I9 435 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 TXLNBQ8N3L3 684 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.12□□□□□ -0.47
APTX-227ENST00000485479 FRS2Q8WU20 508 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 FAF2Q96CS3 445 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 ZNF419Q96HQ0 510 aaPredicted RBP12.12□□□□□ -0.47
APTX-227ENST00000485479 RNF157Q96PX1 679 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 MAGEH1Q9H213 219 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 NUMA1Q14980 2115 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 DDX3YO15523 660 aaKnown RBP12.12□□□□□ -0.47
APTX-227ENST00000485479 TIMM44O43615 452 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 ZNF821O75541 412 aaPredicted RBP12.12□□□□□ -0.47
APTX-227ENST00000485479 SP9P0CG40 484 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 PECAM1P16284 738 aaPredicted RBP12.12□□□□□ -0.47
APTX-227ENST00000485479 HCAR3P49019 387 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 SERPINH1P50454 418 aaKnown RBP12.12□□□□□ -0.47
APTX-227ENST00000485479 PEX5P50542 639 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 STARD3Q14849 445 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 HNRNPA1L2Q32P51 320 aaKnown RBP12.12□□□□□ -0.47
APTX-227ENST00000485479 LRRC38Q5VT99 294 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 AFMIDQ63HM1 303 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 C22orf39Q6P5X5 142 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 TRMT11Q7Z4G4 463 aaKnown RBP12.12□□□□□ -0.47
APTX-227ENST00000485479 MMAAQ8IVH4 418 aaKnown RBP12.12□□□□□ -0.47
APTX-227ENST00000485479 KATNAL2Q8IYT4 538 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 CHST14Q8NCH0 376 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 GRIN3AQ8TCU5 1115 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 MRGPRX1Q96LB2 322 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 CEP41Q9BYV8 373 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 C10orf88Q9H8K7 445 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 DDX56Q9NY93 547 aaKnown RBP12.12□□□□□ -0.47
APTX-227ENST00000485479 HPCAL4Q9UM19 191 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 PCDHA3Q9Y5H8 950 aa12.12□□□□□ -0.47
APTX-227ENST00000485479 KDELR3O43731 214 aa12.11□□□□□ -0.47
APTX-227ENST00000485479 CST8O60676 142 aa12.11□□□□□ -0.47
APTX-227ENST00000485479 TMCC1O94876 653 aa12.11□□□□□ -0.47
APTX-227ENST00000485479 ZRANB2O95218 330 aaKnown RBP eCLIP12.11□□□□□ -0.47
APTX-227ENST00000485479 ASLP04424 464 aa12.11□□□□□ -0.47
APTX-227ENST00000485479 HTR7P34969 479 aa12.11□□□□□ -0.47
APTX-227ENST00000485479 MAGEA9P43362 315 aa12.11□□□□□ -0.47
APTX-227ENST00000485479 SULT2A1Q06520 285 aa12.11□□□□□ -0.47
APTX-227ENST00000485479 LPAL2Q16609 132 aa12.11□□□□□ -0.47
APTX-227ENST00000485479 IFI16Q16666 785 aaKnown RBP12.11□□□□□ -0.47
APTX-227ENST00000485479 PARP15Q460N3 678 aa12.11□□□□□ -0.47
APTX-227ENST00000485479 C9orf64Q5T6V5 341 aa12.11□□□□□ -0.47
APTX-227ENST00000485479 ZNF783Q6ZMS7 281 aa12.11□□□□□ -0.47
APTX-227ENST00000485479 FAM124AQ86V42 546 aa12.11□□□□□ -0.47
APTX-227ENST00000485479 TMPRSS6Q8IU80 811 aa12.11□□□□□ -0.47
APTX-227ENST00000485479 LGMNQ99538 433 aa12.11□□□□□ -0.47
APTX-227ENST00000485479 MAK16Q9BXY0 300 aaKnown RBP12.11□□□□□ -0.47
APTX-227ENST00000485479 SP110Q9HB58 689 aa12.11□□□□□ -0.47
APTX-227ENST00000485479 PDFQ9HBH1 243 aa12.11□□□□□ -0.47
APTX-227ENST00000485479 DTLQ9NZJ0 730 aa12.11□□□□□ -0.47
APTX-227ENST00000485479 HS3ST2Q9Y278 367 aa12.11□□□□□ -0.47
APTX-227ENST00000485479 CACNA1HO95180 2353 aa12.11□□□□□ -0.47
APTX-227ENST00000485479 hCG_1818297A0A087WSY0 165 aa12.1□□□□□ -0.47
APTX-227ENST00000485479 ARHGAP42A6NI28 874 aa12.1□□□□□ -0.47
APTX-227ENST00000485479 SRPRAP08240 638 aaKnown RBP12.1□□□□□ -0.47
APTX-227ENST00000485479 CXCR5P32302 372 aa12.1□□□□□ -0.47
APTX-227ENST00000485479 NNMTP40261 264 aa12.1□□□□□ -0.47
APTX-227ENST00000485479 RGRP47804 291 aa12.1□□□□□ -0.47
APTX-227ENST00000485479 PSMD8P48556 350 aa12.1□□□□□ -0.47
APTX-227ENST00000485479 NDST2P52849 883 aa12.1□□□□□ -0.47
APTX-227ENST00000485479 RETSATQ6NUM9 610 aa12.1□□□□□ -0.47
APTX-227ENST00000485479 ADAT2Q7Z6V5 191 aaKnown RBP12.1□□□□□ -0.47
APTX-227ENST00000485479 SYCE1Q8N0S2 351 aa12.1□□□□□ -0.47
APTX-227ENST00000485479 RYBPQ8N488 228 aaPredicted RBP12.1□□□□□ -0.47
APTX-227ENST00000485479 ATPAF2Q8N5M1 289 aa12.1□□□□□ -0.47
APTX-227ENST00000485479 RNF10Q8N5U6 811 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms