RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	STAT4	Q14765	748 aa		13.59	□□□□□ -0.23
UBA3-210	ENST00000485424	DPCR1	Q3MIW9	517 aa		13.59	□□□□□ -0.23
UBA3-210	ENST00000485424	POM121L1P	Q3SYA9	428 aa		13.59	□□□□□ -0.23
UBA3-210	ENST00000485424	PRAMEF14	Q5SWL7	426 aa		13.59	□□□□□ -0.23
UBA3-210	ENST00000485424	NAPEPLD	Q6IQ20	393 aa		13.59	□□□□□ -0.23
UBA3-210	ENST00000485424		Q6ZVU0	165 aa		13.59	□□□□□ -0.23
UBA3-210	ENST00000485424	FAM71A	Q8IYT1	594 aa		13.59	□□□□□ -0.23
UBA3-210	ENST00000485424	SH2D3C	Q8N5H7	860 aa		13.59	□□□□□ -0.23
UBA3-210	ENST00000485424	PIP4K2C	Q8TBX8	421 aa		13.59	□□□□□ -0.23
UBA3-210	ENST00000485424	CRELD1	Q96HD1	420 aa		13.59	□□□□□ -0.23
UBA3-210	ENST00000485424	NPY6R	Q99463	290 aa		13.59	□□□□□ -0.23
UBA3-210	ENST00000485424	PIGV	Q9NUD9	493 aa		13.59	□□□□□ -0.23
UBA3-210	ENST00000485424	FHOD1	Q9Y613	1164 aa		13.59	□□□□□ -0.23
UBA3-210	ENST00000485424	FAM170A	A1A519	330 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424		E9PAM4	449 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	GOLGA8S	H3BPF8	625 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	PLK4	O00444	970 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	ENC1	O14682	589 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	MCF2L	O15068	1137 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	PLRG1	O43660	514 aa	Known RBP	13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	RTN2	O75298	545 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	ADCY5	O95622	1261 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	EPHA8	P29322	1005 aa	Predicted RBP	13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	OR1E1	P30953	314 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	DRD3	P35462	400 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	VASP	P50552	380 aa	Predicted RBP	13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	CLDN6	P56747	220 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	PPP2CB	P62714	309 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	PPP2CA	P67775	309 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	DNAJC3	Q13217	504 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	SETMAR	Q53H47	684 aa	Predicted RBP	13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	HS1BP3	Q53T59	392 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	MIIP	Q5JXC2	388 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	C6orf118	Q5T5N4	469 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	KLHDC7A	Q5VTJ3	777 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	SETD3	Q86TU7	594 aa	Predicted RBP	13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	TMPRSS12	Q86WS5	348 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	SAP25	Q8TEE9	199 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	FRS2	Q8WU20	508 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	CNDP2	Q96KP4	475 aa	Known RBP	13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	TBCB	Q99426	244 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	ARHGEF38	Q9NXL2	777 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	DMTF1	Q9Y222	760 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	PCDHGA1	Q9Y5H4	931 aa		13.58	□□□□□ -0.24
UBA3-210	ENST00000485424	TLR4	O00206	839 aa		13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	KPNA3	O00505	521 aa	Predicted RBP	13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	SRGAP2	O75044	1071 aa		13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	RFPL3	O75679	317 aa		13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	LSM8	O95777	96 aa	Known RBP	13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	PRNP	P04156	253 aa		13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	EEF1G	P26641	437 aa	Known RBP	13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	HNF1B	P35680	557 aa		13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	SCNN1A	P37088	669 aa		13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	CXCR3	P49682	368 aa		13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	ACADVL	P49748	655 aa		13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	IRAK1	P51617	712 aa		13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	CNTN1	Q12860	1018 aa		13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	SLC25A52	Q3SY17	297 aa		13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	TFAP2D	Q7Z6R9	452 aa		13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	C14orf80	Q86SX3	495 aa		13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	MFSD2A	Q8NA29	543 aa		13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	NXPE2	Q96DL1	559 aa		13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	PGAP3	Q96FM1	320 aa	Predicted RBP	13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	PPP1R16A	Q96I34	528 aa		13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	PREB	Q9HCU5	417 aa		13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	TBC1D30	Q9Y2I9	924 aa		13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	SCN8A	Q9UQD0	1980 aa		13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	FLNB	O75369	2602 aa	Known RBP	13.57	□□□□□ -0.24
UBA3-210	ENST00000485424	PRAMEF26	H0Y7S4	382 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	LAT	O43561	262 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	CNTN5	O94779	1100 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	CDK4	P11802	303 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	SRC	P12931	536 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	UCHL3	P15374	230 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	CHRNA3	P32297	505 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	CDH5	P33151	784 aa	Predicted RBP	13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	GABRB2	P47870	512 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	METAP1	P53582	386 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	NXPH1	P58417	271 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	OVGP1	Q12889	678 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	ARL13B	Q3SXY8	428 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	C5orf22	Q49AR2	442 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	ALF	Q53S48	1182 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	TCP11X2	Q5H9J9	407 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	FKBP15	Q5T1M5	1219 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	NAA35	Q5VZE5	725 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	RETSAT	Q6NUM9	610 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	TRIM69	Q86WT6	500 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	XYLT1	Q86Y38	959 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	EID2	Q8N6I1	236 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	DCAF4L2	Q8NA75	395 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	ANKRD20A12P	Q8NF67	263 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	OR52K2	Q8NGK3	314 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	ALG14	Q96F25	216 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	KLHDC7B	Q96G42	594 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	C1orf74	Q96LT6	269 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	SPON2	Q9BUD6	331 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	STK33	Q9BYT3	514 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms