RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 TCHHQ07283 1943 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 PTPRJQ12913 1337 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 MAPK7Q13164 816 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 STK3Q13188 491 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 SRSF6Q13247 344 aaKnown RBP5.61□□□□□ -1.51
PTPN4-210ENST00000485247 NCAPHQ15003 741 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 KYAT1Q16773 422 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 TDRD10Q5VZ19 366 aaKnown RBP5.61□□□□□ -1.51
PTPN4-210ENST00000485247 OSTM1Q86WC4 334 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 IRF2BP1Q8IU81 584 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 CD302Q8IX05 232 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 FBXL16Q8N461 479 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 TMEM161BQ8NDZ6 487 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 BOD1L1Q8NFC6 3051 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 SKA1Q96BD8 255 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 SGF29Q96ES7 293 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 MAP6Q96JE9 813 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 SLITRK1Q96PX8 696 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 SEMA3CQ99985 751 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 NTPCRQ9BSD7 190 aaKnown RBP5.61□□□□□ -1.51
PTPN4-210ENST00000485247 MSTO1Q9BUK6 570 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 TTLL2Q9BWV7 592 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 AGXT2Q9BYV1 514 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 SLC25A18Q9H1K4 315 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 LHX5Q9H2C1 402 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 C17orf75Q9HAS0 396 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 GDF3Q9NR23 364 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 AASDHPPTQ9NRN7 309 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 DDX19AQ9NUU7 478 aaKnown RBP5.61□□□□□ -1.51
PTPN4-210ENST00000485247 EHD2Q9NZN4 543 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 WDR35Q9P2L0 1181 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 THAP10Q9P2Z0 257 aaPredicted RBP5.61□□□□□ -1.51
PTPN4-210ENST00000485247 MAGEC2Q9UBF1 373 aaPredicted RBP5.61□□□□□ -1.51
PTPN4-210ENST00000485247 SUCOQ9UBS9 1254 aaKnown RBP5.61□□□□□ -1.51
PTPN4-210ENST00000485247 CPSF3Q9UKF6 684 aaKnown RBP5.61□□□□□ -1.51
PTPN4-210ENST00000485247 L1RE1Q9UN81 338 aa5.61□□□□□ -1.51
PTPN4-210ENST00000485247 ICE1Q9Y2F5 2266 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 MYOCOSA0A1B0GUC4 107 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 A0A1W2PNU3 283 aaPredicted RBP5.6□□□□□ -1.51
PTPN4-210ENST00000485247 A0A1W2PPC4 97 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 PMS2P1A4D2B8 440 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 E9PMD0 336 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 F8VP50 259 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 ETV2O00321 342 aaPredicted RBP5.6□□□□□ -1.51
PTPN4-210ENST00000485247 WNT9AO14904 365 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 HNRNPDLO14979 420 aaKnown RBP5.6□□□□□ -1.51
PTPN4-210ENST00000485247 HUS1O60921 280 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 SDC3O75056 442 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 GJB6O95452 261 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 IGHV4-34P06331 123 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 MED14OSP0DP75 135 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 RPS6KB1P23443 525 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 CD38P28907 300 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 PCSK1P29120 753 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 EVCP57679 992 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 NOP14P78316 857 aaKnown RBP5.6□□□□□ -1.51
PTPN4-210ENST00000485247 ENPP2Q13822 863 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 ZNF234Q14588 700 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 GEN1Q17RS7 908 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 HECTD3Q5T447 861 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 LCE4AQ5TA78 99 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 SFMBT2Q5VUG0 894 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 HAUS3Q68CZ6 603 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 KIAA0895LQ68EN5 471 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 RINT1Q6NUQ1 792 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 FAM171BQ6P995 826 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 CPLX2Q6PUV4 134 aaKnown RBP5.6□□□□□ -1.51
PTPN4-210ENST00000485247 VSTM1Q6UX27 236 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 C4orf50Q6ZRC1 276 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 TMC6Q7Z403 805 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 SPPL2CQ8IUH8 684 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 ADGRF2Q8IZF7 708 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 TAB3Q8N5C8 712 aaPredicted RBP5.6□□□□□ -1.51
PTPN4-210ENST00000485247 OR2T3Q8NH03 318 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 UCMAQ8WVF2 138 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 SORCS1Q8WY21 1168 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 MYLPFQ96A32 169 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 ZNF560Q96MR9 790 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 NACA2Q9H009 215 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 ABCG4Q9H172 646 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 ZNF768Q9H5H4 540 aaKnown RBP5.6□□□□□ -1.51
PTPN4-210ENST00000485247 CCSER2Q9H7U1 834 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 EBF2Q9HAK2 575 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 CHORDC1Q9UHD1 332 aaPredicted RBP5.6□□□□□ -1.51
PTPN4-210ENST00000485247 AGAP1Q9UPQ3 857 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 PLAAQ9Y263 795 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 DERAQ9Y315 318 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 C2CD2Q9Y426 696 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 SNX9Q9Y5X1 595 aa5.6□□□□□ -1.51
PTPN4-210ENST00000485247 ITPR3Q14573 2671 aa5.59□□□□□ -1.51
PTPN4-210ENST00000485247 A0A0B4J269 797 aa5.59□□□□□ -1.51
PTPN4-210ENST00000485247 A0A1B0GVM2 712 aa5.59□□□□□ -1.51
PTPN4-210ENST00000485247 A1L4Q6 167 aa5.59□□□□□ -1.51
PTPN4-210ENST00000485247 CDRT15L2A8MXV6 281 aa5.59□□□□□ -1.51
PTPN4-210ENST00000485247 TLR4O00206 839 aa5.59□□□□□ -1.51
PTPN4-210ENST00000485247 NPC1O15118 1278 aa5.59□□□□□ -1.51
PTPN4-210ENST00000485247 NRDCO43847 1150 aa5.59□□□□□ -1.51
PTPN4-210ENST00000485247 CENPBP07199 599 aaPredicted RBP5.59□□□□□ -1.51
PTPN4-210ENST00000485247 PDGFRBP09619 1106 aa5.59□□□□□ -1.51
PTPN4-210ENST00000485247 OR52Z1P0C646 297 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms