RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 MTTPP55157 894 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 LIPMQ5VYY2 423 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 PLEKHH3Q7Z736 793 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 KLHDC8BQ8IXV7 354 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 CNDP1Q96KN2 507 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 PGLYRP2Q96PD5 576 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 SMOQ99835 787 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 OXCT2Q9BYC2 517 aaPredicted RBP20.04■□□□□ 0.8
LIMS2-215ENST00000484252 ACE2Q9BYF1 805 aaPredicted RBP20.04■□□□□ 0.8
LIMS2-215ENST00000484252 KLHL4Q9C0H6 718 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 DRC3Q9H069 523 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 CHRAC1Q9NRG0 131 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 SLC38A7Q9NVC3 462 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 PRPF19Q9UMS4 504 aaKnown RBP20.04■□□□□ 0.8
LIMS2-215ENST00000484252 LOC100653049A0A140TA62 436 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.04■□□□□ 0.8
LIMS2-215ENST00000484252 E9PBE3 544 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 MATN2O00339 956 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 KLHL41O60662 606 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 CABYRO75952 493 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 KRT34O76011 436 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 IRF5Q13568 498 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 DLG2Q15700 870 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 MAP3K21Q5TCX8 1036 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 ACAD11Q709F0 780 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 DRAXINQ8NBI3 349 aaPredicted RBP20.04■□□□□ 0.8
LIMS2-215ENST00000484252 SHKBP1Q8TBC3 707 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 SENP8Q96LD8 212 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 KIFC1Q9BW19 673 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 RHOJQ9H4E5 214 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 WDCPQ9H6R7 721 aa20.04■□□□□ 0.8
LIMS2-215ENST00000484252 ZNF638Q14966 1978 aaKnown RBP20.03■□□□□ 0.8
LIMS2-215ENST00000484252 SLCO1B7G3V0H7 640 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 HDAC3O15379 428 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 UBTFL6P0CB48 400 aaPredicted RBP20.03■□□□□ 0.8
LIMS2-215ENST00000484252 COL6A2P12110 1019 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 YBX3P16989 372 aaKnown RBP eCLIP20.03■□□□□ 0.8
LIMS2-215ENST00000484252 ADSLP30566 484 aaPredicted RBP20.03■□□□□ 0.8
LIMS2-215ENST00000484252 POLD2P49005 469 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 CXCR3P49682 368 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 PSEN2P49810 448 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 RNF220Q5VTB9 566 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 ANKRD23Q86SG2 305 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 SETD3Q86TU7 594 aaPredicted RBP20.03■□□□□ 0.8
LIMS2-215ENST00000484252 TSGA13Q96PP4 275 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 SHCBP1LQ9BZQ2 653 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 VTI1BQ9UEU0 232 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 SLC39A10Q9ULF5 831 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 GNEQ9Y223 722 aaKnown RBP20.03■□□□□ 0.8
LIMS2-215ENST00000484252 SRGAP2BP0DMP2 458 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 RPL14P50914 215 aaKnown RBP20.03■□□□□ 0.8
LIMS2-215ENST00000484252 UGP2Q16851 508 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 SEL1L3Q68CR1 1132 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 C16orf89Q6UX73 402 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 MAPK15Q8TD08 544 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 MS4A4AQ96JQ5 239 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 GBP5Q96PP8 586 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 SERPINI1Q99574 410 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 TASP1Q9H6P5 420 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 MAN1C1Q9NR34 630 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 OR12D3Q9UGF7 316 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 SSX2IPQ9Y2D8 614 aa20.03■□□□□ 0.8
LIMS2-215ENST00000484252 CCL15-CCL14A0A0B4J2E2 113 aa20.02■□□□□ 0.8
LIMS2-215ENST00000484252 HAS3O00219 553 aa20.02■□□□□ 0.8
LIMS2-215ENST00000484252 CASQ2O14958 399 aaPredicted RBP20.02■□□□□ 0.8
LIMS2-215ENST00000484252 TREHO43280 583 aa20.02■□□□□ 0.8
LIMS2-215ENST00000484252 PEX1O43933 1283 aa20.02■□□□□ 0.8
LIMS2-215ENST00000484252 CACNG3O60359 315 aa20.02■□□□□ 0.8
LIMS2-215ENST00000484252 USP17L7P0C7H9 530 aa20.02■□□□□ 0.8
LIMS2-215ENST00000484252 NMBRP28336 390 aa20.02■□□□□ 0.8
LIMS2-215ENST00000484252 PRKAA1Q13131 559 aa20.02■□□□□ 0.8
LIMS2-215ENST00000484252 GRM3Q14832 879 aa20.02■□□□□ 0.8
LIMS2-215ENST00000484252 CCL15Q16663 113 aa20.02■□□□□ 0.8
LIMS2-215ENST00000484252 TWF2Q6IBS0 349 aaKnown RBP20.02■□□□□ 0.8
LIMS2-215ENST00000484252 DCLRE1AQ6PJP8 1040 aa20.02■□□□□ 0.8
LIMS2-215ENST00000484252 ZC3HC1Q86WB0 502 aaKnown RBP20.02■□□□□ 0.8
LIMS2-215ENST00000484252 HPS6Q86YV9 775 aa20.02■□□□□ 0.8
LIMS2-215ENST00000484252 ZMIZ2Q8NF64 920 aa20.02■□□□□ 0.8
LIMS2-215ENST00000484252 NPLOC4Q8TAT6 608 aa20.02■□□□□ 0.8
LIMS2-215ENST00000484252 IRGQQ8WZA9 623 aa20.02■□□□□ 0.8
LIMS2-215ENST00000484252 DPF3Q92784 378 aa20.02■□□□□ 0.8
LIMS2-215ENST00000484252 CCDC124Q96CT7 223 aaKnown RBP20.02■□□□□ 0.8
LIMS2-215ENST00000484252 C1QTNF1Q9BXJ1 281 aa20.02■□□□□ 0.8
LIMS2-215ENST00000484252 TSPYL2Q9H2G4 693 aaPredicted RBP20.02■□□□□ 0.8
LIMS2-215ENST00000484252 CDH9Q9ULB4 789 aa20.02■□□□□ 0.8
LIMS2-215ENST00000484252 AAR2Q9Y312 384 aaKnown RBP20.02■□□□□ 0.8
LIMS2-215ENST00000484252 RGSL1A5PLK6 1076 aa20.01■□□□□ 0.79
LIMS2-215ENST00000484252 JCHAINP01591 159 aa20.01■□□□□ 0.79
LIMS2-215ENST00000484252 EPHX2P34913 555 aa20.01■□□□□ 0.79
LIMS2-215ENST00000484252 DYNC1I2Q13409 638 aaKnown RBP20.01■□□□□ 0.79
LIMS2-215ENST00000484252 SLC12A1Q13621 1099 aa20.01■□□□□ 0.79
LIMS2-215ENST00000484252 PM20D1Q6GTS8 502 aa20.01■□□□□ 0.79
LIMS2-215ENST00000484252 RNF111Q6ZNA4 994 aa20.01■□□□□ 0.79
LIMS2-215ENST00000484252 GPRIN1Q7Z2K8 1008 aa20.01■□□□□ 0.79
LIMS2-215ENST00000484252 KBTBD6Q86V97 674 aa20.01■□□□□ 0.79
LIMS2-215ENST00000484252 ARHGAP18Q8N392 663 aa20.01■□□□□ 0.79
LIMS2-215ENST00000484252 CPSF7Q8N684 471 aaKnown RBP20.01■□□□□ 0.79
LIMS2-215ENST00000484252 GDPD5Q8WTR4 605 aa20.01■□□□□ 0.79
LIMS2-215ENST00000484252 PPP1R13LQ8WUF5 828 aa20.01■□□□□ 0.79
LIMS2-215ENST00000484252 PCED1BQ96HM7 432 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms