RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 TNMDQ9H2S6 317 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 TTYH1Q9H313 450 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-214ENST00000483925 GBA2Q9HCG7 927 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-214ENST00000483925 PDE11AQ9HCR9 933 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 INTS10Q9NVR2 710 aaKnown RBP4.69□□□□□ -1.66
PTCD3-214ENST00000483925 COQ3Q9NZJ6 369 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 HECAQ9UBI9 543 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-214ENST00000483925 TBK1Q9UHD2 729 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 HOOK1Q9UJC3 728 aaKnown RBP4.69□□□□□ -1.66
PTCD3-214ENST00000483925 RCE1Q9Y256 329 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 PCDHB7Q9Y5E2 793 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 DMRT1Q9Y5R6 373 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 AOX1Q06278 1338 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 LOC100509620A0A075B734 347 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 TBKBP1A7MCY6 615 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 CDRT15L2A8MXV6 281 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 EIF3CLB5ME19 914 aaKnown RBP4.68□□□□□ -1.66
PTCD3-214ENST00000483925 KCNJ18B7U540 433 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 CAPN9O14815 690 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 ASAP2O43150 1006 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 RAMP2O60895 175 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 WDR47O94967 919 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 GUCA1CO95843 209 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 FYNP06241 537 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 KRT10P13645 584 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 CPT2P23786 658 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 HOXC8P31273 242 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 UQCRC1P31930 480 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 GCLCP48506 637 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-214ENST00000483925 AMPHP49418 695 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 MTHFSP49914 203 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 DGKQP52824 942 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 UBASH3AP57075 661 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 EFNB1P98172 346 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 ACTN3Q08043 901 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-214ENST00000483925 ZNF844Q08AG5 666 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 NIPAL4Q0D2K0 466 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 SEMA3BQ13214 749 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 FHL3Q13643 280 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 RIN1Q13671 783 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 NFE2L1Q14494 772 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 KCNJ12Q14500 433 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 SEMA3AQ14563 771 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 GSTA3Q16772 222 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 BMT2Q1RMZ1 405 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 GLIPR1L2Q4G1C9 344 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 TMEM196Q5HYL7 178 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 SFRP4Q6FHJ7 346 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-214ENST00000483925 GALNT17Q6IS24 598 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 FAM111BQ6SJ93 734 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 GSTA5Q7RTV2 222 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 SLC15A3Q8IY34 581 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 SYNE4Q8N205 404 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 ANKRD20A12PQ8NF67 263 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 ZBTB45Q96K62 511 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-214ENST00000483925 FER1L6-AS2Q96M78 137 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 AK8Q96MA6 479 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 CRAMP1Q96RY5 1269 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 AGAP2Q99490 1192 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 ENKD1Q9H0I2 346 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 EPC1Q9H2F5 836 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 SLC32A1Q9H598 525 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 KCNK9Q9NPC2 374 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 SLC2A4RGQ9NR83 387 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 SNX15Q9NRS6 342 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 RRP7BPQ9NSQ0 103 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 MRPS18AQ9NVS2 196 aaKnown RBP4.68□□□□□ -1.66
PTCD3-214ENST00000483925 DDX43Q9NXZ2 648 aaKnown RBP4.68□□□□□ -1.66
PTCD3-214ENST00000483925 NCDNQ9UBB6 729 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 STEAP1Q9UHE8 339 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 SH3BGRL2Q9UJC5 107 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 TUBE1Q9UJT0 475 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 RAB21Q9UL25 225 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 TRPC5Q9UL62 973 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-214ENST00000483925 RABL2BQ9UNT1 228 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 COG5Q9UP83 839 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 SLC12A4Q9UP95 1085 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 SLC27A6Q9Y2P4 619 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 MRPS17Q9Y2R5 130 aaKnown RBP4.68□□□□□ -1.66
PTCD3-214ENST00000483925 SH3BP1Q9Y3L3 701 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 POMT1Q9Y6A1 747 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 PNPLA7Q6ZV29 1317 aa4.68□□□□□ -1.66
PTCD3-214ENST00000483925 CCDC187A0A096LP49 1063 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 TRAV34A0A0B4J273 112 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 A0A1W2PRX2 142 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 TCRBV21S2A2A0A5A6 115 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 ARHGAP10A1A4S6 786 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 URADA6NGE7 173 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 NKX2-8O15522 239 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 SEC22BO75396 215 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 FTCDO95954 541 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 HLA-DOAP06340 250 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 PRR35P0CG20 571 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 PCP11498 1178 aaKnown RBP4.67□□□□□ -1.66
PTCD3-214ENST00000483925 PTPN2P17706 415 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 ITGALP20701 1170 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 MMP8P22894 467 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 YY1P25490 414 aa4.67□□□□□ -1.66
PTCD3-214ENST00000483925 PPIFP30405 207 aaKnown RBP4.67□□□□□ -1.66
PTCD3-214ENST00000483925 HTR7P34969 479 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms