RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 ZFP37Q9Y6Q3 630 aaPredicted RBP26.74■■□□□ 1.87
SHOX2-204ENST00000483851 MAGEB16A2A368 324 aa26.73■■□□□ 1.87
SHOX2-204ENST00000483851 HIDE1A8MVS5 230 aa26.73■■□□□ 1.87
SHOX2-204ENST00000483851 F5H423 210 aaPredicted RBP26.73■■□□□ 1.87
SHOX2-204ENST00000483851 SLC7A9P82251 487 aa26.73■■□□□ 1.87
SHOX2-204ENST00000483851 SMAD3P84022 425 aaKnown RBP26.73■■□□□ 1.87
SHOX2-204ENST00000483851 QPCTQ16769 361 aa26.73■■□□□ 1.87
SHOX2-204ENST00000483851 PLPP4Q5VZY2 271 aa26.73■■□□□ 1.87
SHOX2-204ENST00000483851 ZNF449Q6P9G9 518 aa26.73■■□□□ 1.87
SHOX2-204ENST00000483851 GAREM2Q75VX8 874 aa26.73■■□□□ 1.87
SHOX2-204ENST00000483851 YTHDF3Q7Z739 585 aaKnown RBP26.73■■□□□ 1.87
SHOX2-204ENST00000483851 SETD3Q86TU7 594 aaPredicted RBP26.73■■□□□ 1.87
SHOX2-204ENST00000483851 USP33Q8TEY7 942 aa26.73■■□□□ 1.87
SHOX2-204ENST00000483851 PAFAH2Q99487 392 aa26.73■■□□□ 1.87
SHOX2-204ENST00000483851 TRPC7Q9HCX4 862 aa26.73■■□□□ 1.87
SHOX2-204ENST00000483851 A0A1B0GVM2 712 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 TCAF2A6NFQ2 919 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 ANKRD65E5RJM6 399 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 HOXA9P31269 272 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 PPM1LQ5SGD2 360 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 ARMC3Q5W041 872 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 RFWD3Q6PCD5 774 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 CYP4X1Q8N118 509 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 MPP5Q8N3R9 675 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 SLC44A1Q8WWI5 657 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 ARNTL2Q8WYA1 636 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 MYEOVQ96EZ4 313 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 OXNAD1Q96HP4 312 aaPredicted RBP26.72■■□□□ 1.87
SHOX2-204ENST00000483851 SELENOSQ9BQE4 189 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 SLC25A51Q9H1U9 297 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 PLAC1Q9HBJ0 212 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 HAUS2Q9NVX0 235 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 TBK1Q9UHD2 729 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 ZNF510Q9Y2H8 683 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 H3BNC9 293 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 ALDH1A2O94788 518 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 C1QAP02745 245 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 HLA-DQB2P05538 268 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 DNAJB1P25685 340 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 CDH17Q12864 832 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 TMED2Q15363 201 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 TXNDC8Q6A555 127 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 OTOP3Q7RTS5 596 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 TTC17Q96AE7 1141 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 C17orf80Q9BSJ5 609 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 ASAH2Q9NR71 780 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 IKBKGQ9Y6K9 419 aa26.72■■□□□ 1.87
SHOX2-204ENST00000483851 ILVBLA1L0T0 632 aa26.71■■□□□ 1.87
SHOX2-204ENST00000483851 SOBPA7XYQ1 873 aa26.71■■□□□ 1.87
SHOX2-204ENST00000483851 PRAMEF11O60813 436 aa26.71■■□□□ 1.87
SHOX2-204ENST00000483851 MGAT1P26572 445 aa26.71■■□□□ 1.87
SHOX2-204ENST00000483851 ETFBP38117 255 aa26.71■■□□□ 1.87
SHOX2-204ENST00000483851 EPHA5P54756 1037 aa26.71■■□□□ 1.87
SHOX2-204ENST00000483851 SESN2P58004 480 aaPredicted RBP26.71■■□□□ 1.87
SHOX2-204ENST00000483851 FRG1Q14331 258 aaKnown RBP26.71■■□□□ 1.87
SHOX2-204ENST00000483851 KBTBD12Q3ZCT8 623 aa26.71■■□□□ 1.87
SHOX2-204ENST00000483851 TRABD2AQ86V40 505 aa26.71■■□□□ 1.87
SHOX2-204ENST00000483851 LRRC6Q86X45 466 aa26.71■■□□□ 1.87
SHOX2-204ENST00000483851 CIR1Q86X95 450 aaPredicted RBP26.71■■□□□ 1.87
SHOX2-204ENST00000483851 CCDC117Q8IWD4 279 aaPredicted RBP26.71■■□□□ 1.87
SHOX2-204ENST00000483851 ARL14EPQ8N8R7 260 aaPredicted RBP26.71■■□□□ 1.87
SHOX2-204ENST00000483851 OR52K1Q8NGK4 314 aa26.71■■□□□ 1.87
SHOX2-204ENST00000483851 CHMP6Q96FZ7 201 aa26.71■■□□□ 1.87
SHOX2-204ENST00000483851 ZNF419Q96HQ0 510 aaPredicted RBP26.71■■□□□ 1.87
SHOX2-204ENST00000483851 PRICKLE1Q96MT3 831 aaPredicted RBP26.71■■□□□ 1.87
SHOX2-204ENST00000483851 IL22Q9GZX6 179 aa26.71■■□□□ 1.87
SHOX2-204ENST00000483851 VPS45Q9NRW7 570 aa26.71■■□□□ 1.87
SHOX2-204ENST00000483851 MOCS1Q9NZB8 636 aa26.71■■□□□ 1.87
SHOX2-204ENST00000483851 SAMD15Q9P1V8 674 aa26.71■■□□□ 1.87
SHOX2-204ENST00000483851 ZNF180Q9UJW8 692 aa26.71■■□□□ 1.87
SHOX2-204ENST00000483851 TBC1D30Q9Y2I9 924 aa26.71■■□□□ 1.87
SHOX2-204ENST00000483851 MAGEA9P43362 315 aa26.7■■□□□ 1.87
SHOX2-204ENST00000483851 GNA12Q03113 381 aa26.7■■□□□ 1.87
SHOX2-204ENST00000483851 MPP3Q13368 585 aa26.7■■□□□ 1.87
SHOX2-204ENST00000483851 ZNF783Q6ZMS7 281 aa26.7■■□□□ 1.87
SHOX2-204ENST00000483851 Q6ZNB5 142 aa26.7■■□□□ 1.87
SHOX2-204ENST00000483851 MICALCLQ6ZW33 695 aa26.7■■□□□ 1.87
SHOX2-204ENST00000483851 FAM217AQ8IXS0 508 aa26.7■■□□□ 1.87
SHOX2-204ENST00000483851 DNAAF3Q8N9W5 541 aa26.7■■□□□ 1.87
SHOX2-204ENST00000483851 DCAKDQ8WVC6 231 aa26.7■■□□□ 1.87
SHOX2-204ENST00000483851 LSM7Q9UK45 103 aaKnown RBP26.7■■□□□ 1.87
SHOX2-204ENST00000483851 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.7■■□□□ 1.86
SHOX2-204ENST00000483851 J3KR12 359 aa26.7■■□□□ 1.86
SHOX2-204ENST00000483851 POLBP06746 335 aa26.7■■□□□ 1.86
SHOX2-204ENST00000483851 IRF1P10914 325 aa26.7■■□□□ 1.86
SHOX2-204ENST00000483851 ZNF177Q13360 481 aaPredicted RBP26.7■■□□□ 1.86
SHOX2-204ENST00000483851 SPARCL1Q14515 664 aa26.7■■□□□ 1.86
SHOX2-204ENST00000483851 TMCO4Q5TGY1 634 aa26.7■■□□□ 1.86
SHOX2-204ENST00000483851 CASC4Q6P4E1 433 aa26.7■■□□□ 1.86
SHOX2-204ENST00000483851 SLC26A11Q86WA9 606 aa26.7■■□□□ 1.86
SHOX2-204ENST00000483851 CFAP52Q8N1V2 620 aa26.7■■□□□ 1.86
SHOX2-204ENST00000483851 LEMD2Q8NC56 503 aa26.7■■□□□ 1.86
SHOX2-204ENST00000483851 MICAL1Q8TDZ2 1067 aa26.7■■□□□ 1.86
SHOX2-204ENST00000483851 SLC22A12Q96S37 553 aa26.7■■□□□ 1.86
SHOX2-204ENST00000483851 CYP2S1Q96SQ9 504 aa26.7■■□□□ 1.86
SHOX2-204ENST00000483851 INTS9Q9NV88 658 aaKnown RBP26.7■■□□□ 1.86
SHOX2-204ENST00000483851 DPP7Q9UHL4 492 aa26.7■■□□□ 1.86
SHOX2-204ENST00000483851 CPQQ9Y646 472 aa26.7■■□□□ 1.86
SHOX2-204ENST00000483851 TRAV19A0A0A6YYK7 116 aa26.69■■□□□ 1.86
SHOX2-204ENST00000483851 FAM159BA6NKW6 160 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms