RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 DAB2IPQ5VWQ8 1189 aa18.4■□□□□ 0.54
HDAC6-225ENST00000483506 SYT12Q8IV01 421 aa18.4■□□□□ 0.54
HDAC6-225ENST00000483506 MMAAQ8IVH4 418 aaKnown RBP18.4■□□□□ 0.54
HDAC6-225ENST00000483506 ATP11CQ8NB49 1132 aa18.4■□□□□ 0.54
HDAC6-225ENST00000483506 TEKT4Q8WW24 435 aa18.4■□□□□ 0.54
HDAC6-225ENST00000483506 FOXJ1Q92949 421 aa18.4■□□□□ 0.54
HDAC6-225ENST00000483506 FAM131CQ96AQ9 280 aa18.4■□□□□ 0.54
HDAC6-225ENST00000483506 BTBD6Q96KE9 485 aa18.4■□□□□ 0.54
HDAC6-225ENST00000483506 SPON2Q9BUD6 331 aa18.4■□□□□ 0.54
HDAC6-225ENST00000483506 PILRBQ9UKJ0 227 aa18.4■□□□□ 0.54
HDAC6-225ENST00000483506 LAMA1P25391 3075 aa18.39■□□□□ 0.54
HDAC6-225ENST00000483506 C10orf142B7Z368 130 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 K7ERQ8 282 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 EEF2KO00418 725 aaKnown RBP18.39■□□□□ 0.53
HDAC6-225ENST00000483506 SMAD6O43541 496 aaKnown RBP18.39■□□□□ 0.53
HDAC6-225ENST00000483506 ZNF821O75541 412 aaPredicted RBP18.39■□□□□ 0.53
HDAC6-225ENST00000483506 TCF4P15884 667 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 C5AR1P21730 350 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 FECHP22830 423 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 GEMIN4P57678 1058 aaKnown RBP18.39■□□□□ 0.53
HDAC6-225ENST00000483506 POLD3Q15054 466 aaPredicted RBP18.39■□□□□ 0.53
HDAC6-225ENST00000483506 PARP15Q460N3 678 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 ACCSLQ4AC99 568 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 IL31Q6EBC2 164 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 C22orf39Q6P5X5 142 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 LINGO4Q6UY18 593 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 RFX8Q6ZV50 586 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 Q6ZVU0 165 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 DSG4Q86SJ6 1040 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 OR2A12Q8NGT7 310 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 OR8D1Q8WZ84 308 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 ISG20Q96AZ6 181 aaKnown RBP18.39■□□□□ 0.53
HDAC6-225ENST00000483506 HSPA12BQ96MM6 686 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 ANP32EQ9BTT0 268 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 LRRC19Q9H756 370 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 SGK2Q9HBY8 427 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 SPTLC3Q9NUV7 552 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 CTTNBP2NLQ9P2B4 639 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 EVLQ9UI08 416 aaPredicted RBP18.39■□□□□ 0.53
HDAC6-225ENST00000483506 INTUQ9ULD6 942 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 PPM1HQ9ULR3 514 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 FZD4Q9ULV1 537 aa18.39■□□□□ 0.53
HDAC6-225ENST00000483506 ZSCAN5CA6NGD5 496 aaPredicted RBP18.38■□□□□ 0.53
HDAC6-225ENST00000483506 PRR5-ARHGAP8B1AHC4 643 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 MID1O15344 667 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 KDELR3O43731 214 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 MTA2O94776 668 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 PROSCO94903 275 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 ITPKAP23677 461 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 SLC8A1P32418 973 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 MAN1A1P33908 653 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 NDST2P52849 883 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 ARHGAP8P85298 464 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 DPYSQ14117 519 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 TCEAL1Q15170 157 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 ARMCX6Q7L4S7 300 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 PLPP6Q8IY26 295 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 AADATQ8N5Z0 425 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 PCDH20Q8N6Y1 951 aaKnown RBP18.38■□□□□ 0.53
HDAC6-225ENST00000483506 DNASE2BQ8WZ79 361 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 PANX2Q96RD6 677 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 GPR174Q9BXC1 333 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 KLC2Q9H0B6 622 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 BTBD1Q9H0C5 482 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 FBXL12Q9NXK8 326 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 SERGEFQ9UGK8 458 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 NCKAP1Q9Y2A7 1128 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 PI4KAP42356 2102 aa18.38■□□□□ 0.53
HDAC6-225ENST00000483506 CACNA1EQ15878 2313 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 METTL12A8MUP2 240 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 RASA4BC9J798 803 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 RASA4O43374 803 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 LCA5LO95447 670 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 RARAP10276 462 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 GOT1P17174 413 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 ACSL1P33121 698 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 PSMD8P48556 350 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 SERINC3Q13530 473 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 CCDC6Q16204 474 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 FAM46CQ5VWP2 391 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 AFMIDQ63HM1 303 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 TXNRD3NBQ6F5E7 133 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 FAM71BQ8TC56 605 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 PIGKQ92643 395 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 HMCESQ96FZ2 354 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 CCDC114Q96M63 670 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 ZWILCHQ9H900 591 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 TMEM74BQ9NUR3 256 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 CWC15Q9P013 229 aaKnown RBP18.37■□□□□ 0.53
HDAC6-225ENST00000483506 SARDHQ9UL12 918 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 HPCAL4Q9UM19 191 aa18.37■□□□□ 0.53
HDAC6-225ENST00000483506 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.37■□□□□ 0.53
HDAC6-225ENST00000483506 DCHS1Q96JQ0 3298 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 SEMA4FO95754 770 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 IL1BP01584 269 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 CTSLP07711 333 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 ERCC2P18074 760 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 DRD3P35462 400 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 SF3A2Q15428 464 aaKnown RBP18.36■□□□□ 0.53
HDAC6-225ENST00000483506 SMTNL2Q2TAL5 461 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms