RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 ZDHHC2Q9UIJ5 367 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 SLC30A1Q9Y6M5 507 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 PTPRFP10586 1907 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 NFKBIEO00221 500 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 APOL1O14791 398 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 TRIM13O60858 407 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 PIGNO95427 931 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 TPSB2P20231 275 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 MAP4P27816 1152 aaKnown RBP12□□□□□ -0.49
VTI1A-205ENST00000483122 ABCG1P45844 678 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 SESN2P58004 480 aaPredicted RBP12□□□□□ -0.49
VTI1A-205ENST00000483122 NSUN2Q08J23 767 aaKnown RBP eCLIP12□□□□□ -0.49
VTI1A-205ENST00000483122 OXA1LQ15070 435 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 TPSAB1Q15661 275 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 DLG2Q15700 870 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 GPR162Q16538 588 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 HACE1Q8IYU2 909 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 CBR4Q8N4T8 237 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 ANKFN1Q8N957 763 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 CDKL2Q92772 493 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 FBXL20Q96IG2 436 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 NSMCE3Q96MG7 304 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 CGREF1Q99674 301 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 ADI1Q9BV57 179 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 ZC3H12CQ9C0D7 883 aaKnown RBP12□□□□□ -0.49
VTI1A-205ENST00000483122 DRC3Q9H069 523 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 POLR3FQ9H1D9 316 aaPredicted RBP12□□□□□ -0.49
VTI1A-205ENST00000483122 NANOGQ9H9S0 305 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 TCEAL9Q9UHQ7 104 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 FZD1Q9UP38 647 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 B3GNT3Q9Y2A9 372 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 CPQQ9Y646 472 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 PRORSD1PA6NEY8 169 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 A8MU76 341 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 KPNA4O00629 521 aaPredicted RBP12□□□□□ -0.49
VTI1A-205ENST00000483122 PFDN6O15212 129 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 KCNH1O95259 989 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 HDCP19113 662 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 MGAT1P26572 445 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 YAP1P46937 504 aaKnown RBP12□□□□□ -0.49
VTI1A-205ENST00000483122 GSSP48637 474 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 RPL14P50914 215 aaKnown RBP12□□□□□ -0.49
VTI1A-205ENST00000483122 YWHAEP62258 255 aaKnown RBP12□□□□□ -0.49
VTI1A-205ENST00000483122 TRNP1Q6NT89 227 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 FAM117BQ6P1L5 589 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 CYS1Q717R9 158 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 OFCC1Q8IZS5 231 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 CNTD1Q8N815 330 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 PCDH19Q8TAB3 1148 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 ALPK1Q96QP1 1244 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 HERC2P3Q9BVR0 1158 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 DHX35Q9H5Z1 703 aaKnown RBP12□□□□□ -0.49
VTI1A-205ENST00000483122 CAB39LQ9H9S4 337 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 POU2F3Q9UKI9 436 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 CDYLQ9Y232 598 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 RAP2CQ9Y3L5 183 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 ST14Q9Y5Y6 855 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 PSME4Q14997 1843 aa12□□□□□ -0.49
VTI1A-205ENST00000483122 DICER1Q9UPY3 1922 aaKnown RBP11.99□□□□□ -0.49
VTI1A-205ENST00000483122 IQCA1LA6NCM1 817 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 NFIBO00712 420 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 TRIM24O15164 1050 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 SLC22A2O15244 555 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 EDN1P05305 212 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 TFEBP19484 476 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 CCNA2P20248 432 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 IDUAP35475 653 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 POLR2IP36954 125 aaKnown RBP11.99□□□□□ -0.49
VTI1A-205ENST00000483122 NME5P56597 212 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 IGBP1P78318 339 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 MERTKQ12866 999 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 SF3B4Q15427 424 aaKnown RBP eCLIP11.99□□□□□ -0.49
VTI1A-205ENST00000483122 PERM1Q5SV97 790 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 BSPRYQ5W0U4 402 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 ZNF354CQ86Y25 554 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 EPHX4Q8IUS5 362 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 CCDC138Q96M89 665 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 TCF12Q99081 682 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 OLFM1Q99784 485 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 MSTO1Q9BUK6 570 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 TARS2Q9BW92 718 aaKnown RBP11.99□□□□□ -0.49
VTI1A-205ENST00000483122 ASNSD1Q9NWL6 643 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 SBF1O95248 1867 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 FAM149AA5PLN7 773 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 PAPSS1O43252 624 aaPredicted RBP11.99□□□□□ -0.49
VTI1A-205ENST00000483122 BCL10O95999 233 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 ARSAP15289 507 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 TFE3P19532 575 aaPredicted RBP11.99□□□□□ -0.49
VTI1A-205ENST00000483122 TTKP33981 857 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 RAP1GAPP47736 663 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 HSD17B4P51659 736 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 PDK2Q15119 407 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 CA9Q16790 459 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 KIZQ2M2Z5 673 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 ARL13AQ5H913 290 aaPredicted RBP11.99□□□□□ -0.49
VTI1A-205ENST00000483122 GLRA4Q5JXX5 417 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 C6orf10Q5SRN2 563 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 TTC30AQ86WT1 665 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 SNX29P2Q8IUI4 249 aa11.99□□□□□ -0.49
VTI1A-205ENST00000483122 TMCO5AQ8N6Q1 288 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms