RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 CYP2J2P51589 502 aa3.36□□□□□ -1.87
LAPTM4A-202ENST00000483117 PKP1Q13835 747 aa3.36□□□□□ -1.87
LAPTM4A-202ENST00000483117 PLCB4Q15147 1175 aa3.36□□□□□ -1.87
LAPTM4A-202ENST00000483117 ZNF284Q2VY69 593 aa3.36□□□□□ -1.87
LAPTM4A-202ENST00000483117 GSG1LQ6UXU4 331 aa3.36□□□□□ -1.87
LAPTM4A-202ENST00000483117 C11orf96Q7Z7L8 435 aa3.36□□□□□ -1.87
LAPTM4A-202ENST00000483117 NME8Q8N427 588 aa3.36□□□□□ -1.87
LAPTM4A-202ENST00000483117 BICD2Q8TD16 824 aa3.36□□□□□ -1.87
LAPTM4A-202ENST00000483117 HMGB4Q8WW32 186 aa3.36□□□□□ -1.87
LAPTM4A-202ENST00000483117 MUL1Q969V5 352 aa3.36□□□□□ -1.87
LAPTM4A-202ENST00000483117 RTP4Q96DX8 246 aa3.36□□□□□ -1.87
LAPTM4A-202ENST00000483117 Q9N2J8 555 aa3.36□□□□□ -1.87
LAPTM4A-202ENST00000483117 ZDHHC7Q9NXF8 308 aa3.36□□□□□ -1.87
LAPTM4A-202ENST00000483117 FNIP2Q9P278 1114 aa3.36□□□□□ -1.87
LAPTM4A-202ENST00000483117 SWAP70Q9UH65 585 aa3.36□□□□□ -1.87
LAPTM4A-202ENST00000483117 NFU1Q9UMS0 254 aa3.36□□□□□ -1.87
LAPTM4A-202ENST00000483117 CNTN6Q9UQ52 1028 aa3.36□□□□□ -1.87
LAPTM4A-202ENST00000483117 LZTS1Q9Y250 596 aa3.36□□□□□ -1.87
LAPTM4A-202ENST00000483117 PCDHA10Q9Y5I2 948 aa3.36□□□□□ -1.87
LAPTM4A-202ENST00000483117 PLSCR5A0PG75 271 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 CCDC189A1A4V9 331 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 DENND3A2RUS2 1198 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 FAM90A18PA6NE21 464 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 FAM90A16PA6NEW6 464 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 MBD3L5A6NJ08 208 aaPredicted RBP3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 SRRM3A6NNA2 597 aaPredicted RBP3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 FAM90A9PA6NNJ1 464 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 FAM90A5PA8MXJ8 464 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 FAM90A15PP0C7V4 464 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 FAM90A14PP0C7W9 464 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 ABCB4P21439 1286 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 THPOP40225 353 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 RCAN1P53805 252 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 SEC61A1P61619 476 aaKnown RBP3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 GRSF1Q12849 480 aaKnown RBP eCLIP3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 PICALMQ13492 652 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 ZNF718Q3SXZ3 478 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 PLK5Q496M5 336 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 FAM171A1Q5VUB5 890 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 IL31Q6EBC2 164 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 HEPHL1Q6MZM0 1159 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 C8orf82Q6P1X6 216 aaPredicted RBP3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 CLEC4GQ6UXB4 293 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 H1FNTQ75WM6 255 aaPredicted RBP3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 RNF144BQ7Z419 303 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 OR14A16Q8NHC5 309 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 SVIPQ8NHG7 77 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 CEP76Q8TAP6 659 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 CCDC138Q96M89 665 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 MPHOSPH6Q99547 160 aaKnown RBP3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 TP63Q9H3D4 680 aaPredicted RBP3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 RETREG1Q9H6L5 497 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 CHST12Q9NRB3 414 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 OCIAD1Q9NX40 245 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 KCNG2Q9UJ96 466 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 CDH22Q9UJ99 828 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 ERRFI1Q9UJM3 462 aaPredicted RBP3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 RAI2Q9Y5P3 530 aa3.35□□□□□ -1.87
LAPTM4A-202ENST00000483117 ANO9A1A5B4 782 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 PRSS47A8MTI9 375 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 TMCC1O94876 653 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 LARGE1O95461 756 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 UNGP13051 313 aaPredicted RBP3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 HOXB9P17482 250 aaPredicted RBP3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 PTMSP20962 102 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 GNLYP22749 145 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 PRPH2P23942 346 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 TYK2P29597 1187 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 MAN1A1P33908 653 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 AMTP48728 403 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 NEK3P51956 506 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 NUDT6P53370 316 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 MORC3Q14149 939 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 VWA5B1Q5TIE3 1220 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 MTFR2Q6P444 385 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 PCGF5Q86SE9 256 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 VPS52Q8N1B4 723 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 ENDOVQ8N8Q3 282 aaKnown RBP3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 MIGA1Q8NAN2 632 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 NEXN-AS1Q8NBZ9 246 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 OR1N1Q8NGS0 311 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 STYXQ8WUJ0 223 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 EVI5LQ96CN4 794 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 FIZ1Q96SL8 496 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 PDE11AQ9HCR9 933 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 SEPSECSQ9HD40 501 aaKnown RBP3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 TMEM248Q9NWD8 314 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 SLC25A13Q9UJS0 675 aa3.34□□□□□ -1.87
LAPTM4A-202ENST00000483117 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 GRM8O00222 908 aa3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 NPHP1O15259 732 aa3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 ASAP2O43150 1006 aa3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 HEXIM1O94992 359 aaKnown RBP3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 TNFRSF6BO95407 300 aa3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 IFIT2P09913 472 aaKnown RBP3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 GYS1P13807 737 aa3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 BNC1Q01954 994 aa3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 CDK18Q07002 472 aa3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 HLFQ16534 295 aa3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 KRTAP24-1Q3LI83 254 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms