RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 TMEM121BQ9BXQ6 578 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-239ENST00000483086 KLC2Q9H0B6 622 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 PCED1AQ9H1Q7 454 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 TNKS2Q9H2K2 1166 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 SEPT11Q9NVA2 429 aaKnown RBP12.37□□□□□ -0.43
HDLBP-239ENST00000483086 ARHGAP20Q9P2F6 1191 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 SUSD2Q9UGT4 822 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 SLC25A13Q9UJS0 675 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 FZD4Q9ULV1 537 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 BTBD3Q9Y2F9 522 aa12.37□□□□□ -0.43
HDLBP-239ENST00000483086 A0A1W2PPC4 97 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 A0A1W2PR77 199 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 SIGLEC16A6NMB1 481 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 TMCO5BA8MYB1 307 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 DDX3XO00571 662 aaKnown RBP eCLIP12.36□□□□□ -0.43
HDLBP-239ENST00000483086 MCF2LO15068 1137 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 BNIP3LO60238 219 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 SYPP08247 313 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 GNSP15586 552 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 GOT1P17174 413 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 GPD1P21695 349 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 C5AR1P21730 350 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 OR1E1P30953 314 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 SDC4P31431 198 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 ATXN3P54252 364 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-239ENST00000483086 SHC2P98077 582 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 NRG1Q02297 640 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-239ENST00000483086 C1QBPQ07021 282 aaKnown RBP12.36□□□□□ -0.43
HDLBP-239ENST00000483086 FOXC1Q12948 553 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 MTA1Q13330 715 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 SHBQ15464 509 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 KLHL40Q2TBA0 621 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 ACCSLQ4AC99 568 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 PRAMEF14Q5SWL7 426 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 PIP5KL1Q5T9C9 394 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 ACAD10Q6JQN1 1059 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 CYP4V2Q6ZWL3 525 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-239ENST00000483086 RABEPKQ7Z6M1 372 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 MSANTD4Q8NCY6 345 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 PIP4K2CQ8TBX8 421 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 MCEEQ96PE7 176 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 SELENOOQ9BVL4 669 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 ACE2Q9BYF1 805 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-239ENST00000483086 ZYG11BQ9C0D3 744 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 OSBPL2Q9H1P3 480 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 GAREM1Q9H706 876 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 OSGEPQ9NPF4 335 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 PPARGC1AQ9UBK2 798 aaKnown RBP12.36□□□□□ -0.43
HDLBP-239ENST00000483086 OR12D3Q9UGF7 316 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 DNAI1Q9UI46 699 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 SCML1Q9UN30 329 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 ANKRD6Q9Y2G4 727 aa12.36□□□□□ -0.43
HDLBP-239ENST00000483086 FCF1Q9Y324 198 aaKnown RBP12.36□□□□□ -0.43
HDLBP-239ENST00000483086 DSPP15924 2871 aaKnown RBP12.36□□□□□ -0.43
HDLBP-239ENST00000483086 ILVBLA1L0T0 632 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 H0Y8X5 98 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 LATO43561 262 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 PLRG1O43660 514 aaKnown RBP12.35□□□□□ -0.43
HDLBP-239ENST00000483086 RNASEH1O60930 286 aaKnown RBP12.35□□□□□ -0.43
HDLBP-239ENST00000483086 ADH1BP00325 375 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 CALB1P05937 261 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 PLEKP08567 350 aaPredicted RBP12.35□□□□□ -0.43
HDLBP-239ENST00000483086 SKILP12757 684 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 FERP16591 822 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 GKP32189 559 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 CTSKP43235 329 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 ZNF143P52747 638 aaPredicted RBP12.35□□□□□ -0.43
HDLBP-239ENST00000483086 OXCT1P55809 520 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 GNA12Q03113 381 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 CA9Q16790 459 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 C6orf118Q5T5N4 469 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 HGSNATQ68CP4 663 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 C22orf39Q6P5X5 142 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 LRRC31Q6UY01 552 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 LEKR1Q6ZMV7 388 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 DBX2Q6ZNG2 339 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 DPY19L3Q6ZPD9 716 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 ATP11CQ8NB49 1132 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 OR2T34Q8NGX1 318 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 OR14C36Q8NHC7 312 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 BAHD1Q8TBE0 780 aaPredicted RBP12.35□□□□□ -0.43
HDLBP-239ENST00000483086 OR8D1Q8WZ84 308 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 NTAN1Q96AB6 310 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 PEBP4Q96S96 227 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 OMDQ99983 421 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 SPON2Q9BUD6 331 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 HAUS4Q9H6D7 363 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 TMEM248Q9NWD8 314 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 GPATCH2LQ9NWQ4 482 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 TOR4AQ9NXH8 423 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 AIPL1Q9NZN9 384 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 NCKAP1Q9Y2A7 1128 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 CA5BQ9Y2D0 317 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 WASF2Q9Y6W5 498 aa12.35□□□□□ -0.43
HDLBP-239ENST00000483086 NBEAQ8NFP9 2946 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 SHROOM3Q8TF72 1996 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 A0A1W2PQC6 194 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 SMTNL1A8MU46 457 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 CBX4O00257 560 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 HYAL3O43820 417 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms