RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 VAV1P15498 845 aa21.35■■□□□ 1.01
SEC13-217ENST00000482647 TPMTP51580 245 aa21.35■■□□□ 1.01
SEC13-217ENST00000482647 SFSWAPQ12872 951 aaKnown RBP21.35■■□□□ 1.01
SEC13-217ENST00000482647 SERINC3Q13530 473 aa21.35■■□□□ 1.01
SEC13-217ENST00000482647 PLK5Q496M5 336 aa21.35■■□□□ 1.01
SEC13-217ENST00000482647 ATP13A4Q4VNC1 1196 aa21.35■■□□□ 1.01
SEC13-217ENST00000482647 ZFYVE27Q5T4F4 411 aa21.35■■□□□ 1.01
SEC13-217ENST00000482647 CACUL1Q86Y37 369 aa21.35■■□□□ 1.01
SEC13-217ENST00000482647 TXLNBQ8N3L3 684 aa21.35■■□□□ 1.01
SEC13-217ENST00000482647 FRMD1Q8N878 549 aa21.35■■□□□ 1.01
SEC13-217ENST00000482647 ACRBPQ8NEB7 543 aa21.35■■□□□ 1.01
SEC13-217ENST00000482647 TSC1Q92574 1164 aa21.35■■□□□ 1.01
SEC13-217ENST00000482647 FAM129BQ96TA1 746 aa21.35■■□□□ 1.01
SEC13-217ENST00000482647 DUSP15Q9H1R2 295 aaPredicted RBP21.35■■□□□ 1.01
SEC13-217ENST00000482647 MBD1Q9UIS9 605 aaPredicted RBP21.35■■□□□ 1.01
SEC13-217ENST00000482647 FARP1Q9Y4F1 1045 aaPredicted RBP21.35■■□□□ 1.01
SEC13-217ENST00000482647 USP34Q70CQ2 3546 aa21.35■■□□□ 1.01
SEC13-217ENST00000482647 DOCK4Q8N1I0 1966 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 IGHV1OR15-9A0A0B4J2B8 117 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 ARHGAP42A6NI28 874 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 BUB1O43683 1085 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 BCKDHBP21953 392 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 AMPD1P23109 780 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 RECQLP46063 649 aaPredicted RBP21.34■■□□□ 1.01
SEC13-217ENST00000482647 MRE11P49959 708 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 ARSEP51690 589 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 VAV2P52735 878 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 TTC31Q49AM3 519 aaPredicted RBP21.34■■□□□ 1.01
SEC13-217ENST00000482647 LRRC38Q5VT99 294 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 AFMIDQ63HM1 303 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 TMCO3Q6UWJ1 677 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 Q6ZVU0 165 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 LPCAT2Q7L5N7 544 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 KIAA1328Q86T90 577 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 MMAAQ8IVH4 418 aaKnown RBP21.34■■□□□ 1.01
SEC13-217ENST00000482647 OR8D1Q8WZ84 308 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 CELF6Q96J87 481 aaKnown RBP21.34■■□□□ 1.01
SEC13-217ENST00000482647 LOXL4Q96JB6 756 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 CALN1Q9BXU9 219 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 SLC39A8Q9C0K1 460 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 KLC2Q9H0B6 622 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 GMEB2Q9UKD1 530 aa21.34■■□□□ 1.01
SEC13-217ENST00000482647 PIEZO1Q92508 2521 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 MUC22E2RYF6 1773 aaPredicted RBP21.33■■□□□ 1.01
SEC13-217ENST00000482647 FANCMQ8IYD8 2048 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 RCCD1A6NED2 376 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 BTNL10A8MVZ5 291 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 MCF2LO15068 1137 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 ALOX15BO15296 676 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 SPOPO43791 374 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 BNIP3LO60238 219 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 BUB1BO60566 1050 aaPredicted RBP21.33■■□□□ 1.01
SEC13-217ENST00000482647 NDUFS2O75306 463 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 IL1BP01584 269 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 IGLV3-19P01714 112 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 CD48P09326 243 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 COMTP21964 271 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 IL4RP24394 825 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 CD6P30203 668 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 PAPOLAP51003 745 aaKnown RBP21.33■■□□□ 1.01
SEC13-217ENST00000482647 NAP1L1P55209 391 aaKnown RBP21.33■■□□□ 1.01
SEC13-217ENST00000482647 DPYSL3Q14195 570 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 CST6Q15828 149 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 SPDYCQ5MJ68 293 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 C22orf39Q6P5X5 142 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 RHOT1Q8IXI2 618 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 PCDH20Q8N6Y1 951 aaKnown RBP21.33■■□□□ 1.01
SEC13-217ENST00000482647 OR2A12Q8NGT7 310 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 CASKIN2Q8WXE0 1202 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 RUBCNQ92622 972 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 ISG20Q96AZ6 181 aaKnown RBP21.33■■□□□ 1.01
SEC13-217ENST00000482647 PABPC3Q9H361 631 aaKnown RBP21.33■■□□□ 1.01
SEC13-217ENST00000482647 NCDNQ9UBB6 729 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 NCKAP1Q9Y2A7 1128 aa21.33■■□□□ 1.01
SEC13-217ENST00000482647 GPR179Q6PRD1 2367 aa21.33■■□□□ 1
SEC13-217ENST00000482647 PJA2O43164 708 aa21.32■■□□□ 1
SEC13-217ENST00000482647 CD160O95971 181 aa21.32■■□□□ 1
SEC13-217ENST00000482647 ADH1BP00325 375 aa21.32■■□□□ 1
SEC13-217ENST00000482647 RETP07949 1114 aa21.32■■□□□ 1
SEC13-217ENST00000482647 SLC8A1P32418 973 aa21.32■■□□□ 1
SEC13-217ENST00000482647 DNA2P51530 1060 aa21.32■■□□□ 1
SEC13-217ENST00000482647 RPL6Q02878 288 aaKnown RBP21.32■■□□□ 1
SEC13-217ENST00000482647 INO80DQ53TQ3 878 aaPredicted RBP21.32■■□□□ 1
SEC13-217ENST00000482647 FAM46CQ5VWP2 391 aa21.32■■□□□ 1
SEC13-217ENST00000482647 PMS2CLQ68D20 193 aa21.32■■□□□ 1
SEC13-217ENST00000482647 LEKR1Q6ZMV7 388 aa21.32■■□□□ 1
SEC13-217ENST00000482647 CCDC112Q8NEF3 446 aa21.32■■□□□ 1
SEC13-217ENST00000482647 GANCQ8TET4 914 aa21.32■■□□□ 1
SEC13-217ENST00000482647 TOE1Q96GM8 510 aaKnown RBP21.32■■□□□ 1
SEC13-217ENST00000482647 ZNF670Q9BS34 389 aa21.32■■□□□ 1
SEC13-217ENST00000482647 TNKS2Q9H2K2 1166 aa21.32■■□□□ 1
SEC13-217ENST00000482647 KLHL11Q9NVR0 708 aa21.32■■□□□ 1
SEC13-217ENST00000482647 PPM1HQ9ULR3 514 aa21.32■■□□□ 1
SEC13-217ENST00000482647 FCF1Q9Y324 198 aaKnown RBP21.32■■□□□ 1
SEC13-217ENST00000482647 ALG6Q9Y672 507 aa21.32■■□□□ 1
SEC13-217ENST00000482647 CKAP5Q14008 2032 aa21.31■■□□□ 1
SEC13-217ENST00000482647 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.31■■□□□ 1
SEC13-217ENST00000482647 DFFAO00273 331 aa21.31■■□□□ 1
SEC13-217ENST00000482647 ZNF821O75541 412 aaPredicted RBP21.31■■□□□ 1
SEC13-217ENST00000482647 C5AR1P21730 350 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms