RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 RNPEPQ9H4A4 650 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 PDZD7Q9H5P4 517 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 PCDH9Q9HC56 1237 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 UBN1Q9NPG3 1134 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 FAM86C1Q9NVL1 165 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 SENP1Q9P0U3 644 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 FETUBQ9UGM5 382 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 SHOC2Q9UQ13 582 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 Q9Y3F1 56 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 NEU2Q9Y3R4 380 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 NRCAMQ92823 1304 aa7.98□□□□□ -1.13
SNX13-208ENST00000482558 hCG_1818297A0A087WSY0 165 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 A0A087WZ62 844 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 SMIM35A0A1B0GVV1 85 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 TCRBV7S2A1N4TA0A589 114 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 BLACEA4D250 179 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 C5orf60A6NFR6 353 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 TTC36A6NLP5 189 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 PLOD3O60568 738 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 CDH16O75309 829 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 CRTAMO95727 393 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 CXCL8P10145 99 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 CYP2C8P10632 490 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 GNAT1P11488 350 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 NAT1P18440 290 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 IVDP26440 423 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 KLRC2P26717 231 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 STIP1P31948 543 aaKnown RBP7.97□□□□□ -1.13
SNX13-208ENST00000482558 PPM1AP35813 382 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 MAGEA9P43362 315 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 KPNA1P52294 538 aaPredicted RBP7.97□□□□□ -1.13
SNX13-208ENST00000482558 ITGA8P53708 1063 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 SLC18A1P54219 525 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 RAD23BP54727 409 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 TAS2R40P59535 323 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 PFKPQ01813 784 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 ZP2Q05996 745 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 IKZF1Q13422 519 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 ACVR2BQ13705 512 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 BLMHQ13867 455 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 PDK2Q15119 407 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 TAZQ16635 292 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 BOLA3Q53S33 107 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 ATAT1Q5SQI0 421 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 GKAP1Q5VSY0 366 aaPredicted RBP7.97□□□□□ -1.13
SNX13-208ENST00000482558 EEF1DP3Q658K8 133 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 JADE1Q6IE81 842 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 HIBCHQ6NVY1 386 aaPredicted RBP7.97□□□□□ -1.13
SNX13-208ENST00000482558 AADACL2Q6P093 401 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 NOTUMQ6P988 496 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 SLC27A1Q6PCB7 646 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 DARS2Q6PI48 645 aaKnown RBP7.97□□□□□ -1.13
SNX13-208ENST00000482558 PPP1R21Q6ZMI0 780 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 BBS12Q6ZW61 710 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 ARCQ7LC44 396 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 GPR142Q7Z601 462 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 ANKS1BQ7Z6G8 1248 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 GALNT5Q7Z7M9 940 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 CDH24Q86UP0 819 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 TDRPQ86YL5 185 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 ALLCQ8N6M5 410 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 ANKS4BQ8N8V4 417 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 SLC4A11Q8NBS3 891 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 BVESQ8NE79 360 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 BEST2Q8NFU1 509 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 MYCBPAPQ8TBZ2 947 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 USP13Q92995 863 aaPredicted RBP7.97□□□□□ -1.13
SNX13-208ENST00000482558 TEKT5Q96M29 485 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 CCT8L2Q96SF2 557 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 MYCBPQ99417 103 aaPredicted RBP7.97□□□□□ -1.13
SNX13-208ENST00000482558 FDXACB1Q9BRP7 624 aaPredicted RBP7.97□□□□□ -1.13
SNX13-208ENST00000482558 CNPY3Q9BT09 278 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 KATNAL1Q9BW62 490 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 SEZ6LQ9BYH1 1024 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 KATNBL1Q9H079 304 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 EPB41L4BQ9H329 900 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 SEMA4AQ9H3S1 761 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 SMOC1Q9H4F8 434 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 PRDM7Q9NQW5 492 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 PDGFCQ9NRA1 345 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 CHST7Q9NS84 486 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 THG1LQ9NWX6 298 aaKnown RBP7.97□□□□□ -1.13
SNX13-208ENST00000482558 DPP3Q9NY33 737 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 CHORDC1Q9UHD1 332 aaPredicted RBP7.97□□□□□ -1.13
SNX13-208ENST00000482558 LGALS13Q9UHV8 139 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 SIX4Q9UIU6 781 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 ZNF148Q9UQR1 794 aa7.97□□□□□ -1.13
SNX13-208ENST00000482558 ZNF236Q9UL36 1845 aa7.96□□□□□ -1.13
SNX13-208ENST00000482558 LRRD1A4D1F6 860 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 BTBD19C9JJ37 291 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 E7EVH7 732 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 MYO1CO00159 1063 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 AQP7O14520 342 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 DNALI1O14645 258 aaPredicted RBP7.96□□□□□ -1.14
SNX13-208ENST00000482558 B4GALT5O43286 388 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 TSPAN1O60635 241 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 TP53P04637 393 aaPredicted RBP7.96□□□□□ -1.14
SNX13-208ENST00000482558 ITGB3P05106 788 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 MMP3P08254 477 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 ATP2A2P16615 1042 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms