RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 MPP6Q9NZW5 540 aa9.96□□□□□ -0.82
TMEM39A-207ENST00000482162 NEU3Q9UQ49 428 aa9.96□□□□□ -0.82
TMEM39A-207ENST00000482162 DMTF1Q9Y222 760 aa9.96□□□□□ -0.82
TMEM39A-207ENST00000482162 CFAP47Q6ZTR5 3102 aa9.96□□□□□ -0.82
TMEM39A-207ENST00000482162 CHD5Q8TDI0 1954 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 SIGLEC16A6NMB1 481 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 RNF103O00237 685 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 KCNK3O14649 394 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 SMAD6O43541 496 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 RTN2O75298 545 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 MBD3O95983 291 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 CTSLP07711 333 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 RHOCP08134 193 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 CD38P28907 300 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 OR1E1P30953 314 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 CHRNA3P32297 505 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 RFC1P35251 1148 aaPredicted RBP9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 KRT83P78385 493 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 SCAPQ12770 1279 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 CNTN1Q12860 1018 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 OVGP1Q12889 678 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 SUZ12Q15022 739 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 NFKBIBQ15653 356 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 SKOR2Q2VWA4 1001 aaPredicted RBP9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 PPP1R15BQ5SWA1 713 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 CCDC183Q5T5S1 534 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 PIP5KL1Q5T9C9 394 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 LAYNQ6UX15 382 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 CCNI2Q6ZMN8 369 aaPredicted RBP9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 MON1BQ7L1V2 547 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 KANSL1Q7Z3B3 1105 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 IRF2BP2Q7Z5L9 587 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 IQCHQ86VS3 1027 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 FAM131BQ86XD5 332 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 CHCHD4Q8N4Q1 142 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 C3orf20Q8ND61 904 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 OR7D4Q8NG98 312 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 JOSD2Q8TAC2 188 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 PIP4K2CQ8TBX8 421 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 SNX19Q92543 992 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 NTAN1Q96AB6 310 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 ISG20Q96AZ6 181 aaKnown RBP9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 BPIFA3Q9BQP9 254 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 HDAC8Q9BY41 377 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 ZYG11BQ9C0D3 744 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 CEP44Q9C0F1 390 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 MUC3BQ9H195 1237 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 OR12D3Q9UGF7 316 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 SLC25A13Q9UJS0 675 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 KLK13Q9UKR3 277 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 MYO6Q9UM54 1294 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 BTBD3Q9Y2F9 522 aa9.95□□□□□ -0.82
TMEM39A-207ENST00000482162 TBC1D3DA0A087WVF3 549 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 TBC1D3IA0A087WXS9 549 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 TBC1D3EA0A087X179 549 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 TBC1D3KA0A087X1G2 549 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 TBC1D3FA6NER0 549 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 FAM47DPA6NHR8 397 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 TBC1D3LB9A6J9 549 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 FAM72CH0Y354 149 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 TLR4O00206 839 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 PLK4O00444 970 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 TPM2P07951 284 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 TBC1D3HP0C7X1 549 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 FTH1P19P0C7X4 201 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 KRT3P12035 628 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 ATP1A3P13637 1013 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 RHOQP17081 205 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 GLDCP23378 1020 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 SDC4P31431 198 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 GRK6P43250 576 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 NUMBP49757 651 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 NXPH1P58417 271 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 PPP2CBP62714 309 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 PPP2CAP67775 309 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 ARF5P84085 180 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 ATP11AP98196 1134 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 GNA12Q03113 381 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 UBXN1Q04323 297 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 TYRO3Q06418 890 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 C15orf59Q2T9L4 293 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 ACCSLQ4AC99 568 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 FAM72AQ5TYM5 149 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 TBC1D3GQ6DHY5 549 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 TBC1D3CQ6IPX1 549 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 NAPEPLDQ6IQ20 393 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 FAM72DQ6L9T8 149 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 WDR59Q6PJI9 974 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 LRSAM1Q6UWE0 723 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 DPY19L3Q6ZPD9 716 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 TFAP2DQ7Z6R9 452 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 FAM72BQ86X60 149 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 SPATS2Q86XZ4 545 aaKnown RBP9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 TBC1D3Q8IZP1 549 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 ATP11CQ8NB49 1132 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 TMEM145Q8NBT3 493 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 NEK11Q8NG66 645 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 SAP25Q8TEE9 199 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 BAP1Q92560 729 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms