RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 C17orf99Q6UX52 265 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 DEF8Q6ZN54 512 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 CYB5R4Q7L1T6 521 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 MAATS1Q7Z4T9 603 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 TRIM74Q86UV6 250 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 TRIM73Q86UV7 250 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 DDIASQ8IXT1 998 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 PLD5Q8N7P1 536 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 ZNF366Q8N895 744 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 PPHLN1Q8NEY8 458 aaKnown RBP6.16□□□□□ -1.42
SF3B1-210ENST00000482158 CNOT9Q92600 299 aaKnown RBP6.16□□□□□ -1.42
SF3B1-210ENST00000482158 EME1Q96AY2 570 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 USP44Q9H0E7 712 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 HIPK3Q9H422 1215 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 CXorf56Q9H5V9 222 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 PAPOLBQ9NRJ5 636 aaKnown RBP6.16□□□□□ -1.42
SF3B1-210ENST00000482158 TMEM45AQ9NWC5 275 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 AGO2Q9UKV8 859 aaKnown RBP6.16□□□□□ -1.42
SF3B1-210ENST00000482158 CNPY2Q9Y2B0 182 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 FRMD4BQ9Y2L6 1034 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 CLDN16Q9Y5I7 305 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 MST1RQ04912 1400 aa6.16□□□□□ -1.42
SF3B1-210ENST00000482158 TRBV5-7A0A0A0MS05 114 aa6.15□□□□□ -1.42
SF3B1-210ENST00000482158 KIR2DS5A0A0G2JLQ3 304 aa6.15□□□□□ -1.42
SF3B1-210ENST00000482158 OR6C68A6NDL8 312 aa6.15□□□□□ -1.42
SF3B1-210ENST00000482158 GAGE10A6NGK3 116 aa6.15□□□□□ -1.42
SF3B1-210ENST00000482158 KIR2DS3K7RE56 304 aa6.15□□□□□ -1.42
SF3B1-210ENST00000482158 RHODO00212 210 aa6.15□□□□□ -1.42
SF3B1-210ENST00000482158 SPTLC2O15270 562 aa6.15□□□□□ -1.42
SF3B1-210ENST00000482158 CNOT3O75175 753 aaKnown RBP6.15□□□□□ -1.42
SF3B1-210ENST00000482158 ADAP00813 363 aa6.15□□□□□ -1.42
SF3B1-210ENST00000482158 KLRC2P26717 231 aa6.15□□□□□ -1.42
SF3B1-210ENST00000482158 KRT9P35527 623 aa6.15□□□□□ -1.42
SF3B1-210ENST00000482158 ZNF91Q05481 1191 aa6.15□□□□□ -1.42
SF3B1-210ENST00000482158 ZNF667Q5HYK9 610 aa6.15□□□□□ -1.42
SF3B1-210ENST00000482158 SLC2A7Q6PXP3 512 aa6.15□□□□□ -1.42
SF3B1-210ENST00000482158 C1orf122Q6ZSJ8 110 aa6.15□□□□□ -1.42
SF3B1-210ENST00000482158 DNAJC10Q8IXB1 793 aa6.15□□□□□ -1.42
SF3B1-210ENST00000482158 ZCCHC10Q8TBK6 192 aa6.15□□□□□ -1.42
SF3B1-210ENST00000482158 HDAC7Q8WUI4 952 aa6.15□□□□□ -1.42
SF3B1-210ENST00000482158 SKA1Q96BD8 255 aa6.15□□□□□ -1.42
SF3B1-210ENST00000482158 MSI2Q96DH6 328 aaKnown RBP6.15□□□□□ -1.42
SF3B1-210ENST00000482158 CLMNQ96JQ2 1002 aa6.15□□□□□ -1.42
SF3B1-210ENST00000482158 TMEM247A6NEH6 219 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 KCNU1A8MYU2 1149 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 ADAM10O14672 748 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 STRNO43815 780 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 HBP1O60381 514 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 TLR2O60603 784 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 CBX6O95503 412 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 PRR35P0CG20 571 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 SSBP2P81877 361 aaPredicted RBP6.14□□□□□ -1.43
SF3B1-210ENST00000482158 PMPCAQ10713 525 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 PTP4A2Q12974 167 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 ISM2Q6H9L7 571 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 FAM180BQ6P0A1 224 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 CCDC25Q86WR0 208 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 TNIP2Q8NFZ5 429 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 FAR1Q8WVX9 515 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 HSPH1Q92598 858 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 MPHOSPH8Q99549 860 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 SLC32A1Q9H598 525 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 AAMDCQ9H7C9 122 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 ATP8A2Q9NTI2 1148 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 SMC4Q9NTJ3 1288 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 GRHL1Q9NZI5 618 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 HCN3Q9P1Z3 774 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 PTGFRNQ9P2B2 879 aa6.14□□□□□ -1.43
SF3B1-210ENST00000482158 TTBK1Q5TCY1 1321 aaPredicted RBP6.14□□□□□ -1.43
SF3B1-210ENST00000482158 C17orf113A0A1B0GUU1 675 aa6.13□□□□□ -1.43
SF3B1-210ENST00000482158 DPPA5A6NC42 116 aa6.13□□□□□ -1.43
SF3B1-210ENST00000482158 F8W810 466 aa6.13□□□□□ -1.43
SF3B1-210ENST00000482158 TLX3O43711 291 aaPredicted RBP6.13□□□□□ -1.43
SF3B1-210ENST00000482158 LCKP06239 509 aa6.13□□□□□ -1.43
SF3B1-210ENST00000482158 CIITAP33076 1130 aa6.13□□□□□ -1.43
SF3B1-210ENST00000482158 RXRGP48443 463 aa6.13□□□□□ -1.43
SF3B1-210ENST00000482158 GEMIN4P57678 1058 aaKnown RBP6.13□□□□□ -1.43
SF3B1-210ENST00000482158 ID2Q02363 134 aa6.13□□□□□ -1.43
SF3B1-210ENST00000482158 SRSF4Q08170 494 aaKnown RBP6.13□□□□□ -1.43
SF3B1-210ENST00000482158 MAPRE1Q15691 268 aaKnown RBP6.13□□□□□ -1.43
SF3B1-210ENST00000482158 Q4G0T1 1027 aa6.13□□□□□ -1.43
SF3B1-210ENST00000482158 SYTL3Q4VX76 610 aa6.13□□□□□ -1.43
SF3B1-210ENST00000482158 ENTPD8Q5MY95 495 aa6.13□□□□□ -1.43
SF3B1-210ENST00000482158 PIK3CD-AS1Q5SR53 167 aa6.13□□□□□ -1.43
SF3B1-210ENST00000482158 FAM69AQ5T7M9 428 aa6.13□□□□□ -1.43
SF3B1-210ENST00000482158 RSRC2Q7L4I2 434 aaKnown RBP6.13□□□□□ -1.43
SF3B1-210ENST00000482158 KDELC2Q7Z4H8 507 aa6.13□□□□□ -1.43
SF3B1-210ENST00000482158 TBC1D1Q86TI0 1168 aaPredicted RBP6.13□□□□□ -1.43
SF3B1-210ENST00000482158 ARMC8Q8IUR7 673 aa6.13□□□□□ -1.43
SF3B1-210ENST00000482158 CNGA4Q8IV77 575 aa6.13□□□□□ -1.43
SF3B1-210ENST00000482158 SRRM1Q8IYB3 904 aaKnown RBP6.13□□□□□ -1.43
SF3B1-210ENST00000482158 TEFMQ96QE5 360 aaKnown RBP6.13□□□□□ -1.43
SF3B1-210ENST00000482158 CRAMP1Q96RY5 1269 aa6.13□□□□□ -1.43
SF3B1-210ENST00000482158 ACTR5Q9H9F9 607 aaPredicted RBP6.13□□□□□ -1.43
SF3B1-210ENST00000482158 THSD1Q9NS62 852 aa6.13□□□□□ -1.43
SF3B1-210ENST00000482158 DHDHQ9UQ10 334 aa6.13□□□□□ -1.43
SF3B1-210ENST00000482158 A0A1W2PPC1 479 aa6.12□□□□□ -1.43
SF3B1-210ENST00000482158 PABPN1LA6NDY0 278 aaKnown RBP6.12□□□□□ -1.43
SF3B1-210ENST00000482158 CEP104O60308 925 aa6.12□□□□□ -1.43
SF3B1-210ENST00000482158 SERPINC1P01008 464 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms