RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 CDR2Q01850 454 aa19.01■□□□□ 0.63
CLK1-211ENST00000481641 SCAPQ12770 1279 aa19.01■□□□□ 0.63
CLK1-211ENST00000481641 C15orf59Q2T9L4 293 aaPredicted RBP19.01■□□□□ 0.63
CLK1-211ENST00000481641 CCNI2Q6ZMN8 369 aaPredicted RBP19.01■□□□□ 0.63
CLK1-211ENST00000481641 SETD3Q86TU7 594 aaPredicted RBP19.01■□□□□ 0.63
CLK1-211ENST00000481641 CHST14Q8NCH0 376 aa19.01■□□□□ 0.63
CLK1-211ENST00000481641 MSANTD4Q8NCY6 345 aa19.01■□□□□ 0.63
CLK1-211ENST00000481641 SPON2Q9BUD6 331 aa19.01■□□□□ 0.63
CLK1-211ENST00000481641 C2orf49Q9BVC5 232 aaPredicted RBP19.01■□□□□ 0.63
CLK1-211ENST00000481641 MAGEB5Q9BZ81 275 aa19.01■□□□□ 0.63
CLK1-211ENST00000481641 TNKS2Q9H2K2 1166 aa19.01■□□□□ 0.63
CLK1-211ENST00000481641 CA5BQ9Y2D0 317 aa19.01■□□□□ 0.63
CLK1-211ENST00000481641 PAXBP1Q9Y5B6 917 aa19.01■□□□□ 0.63
CLK1-211ENST00000481641 GOLGA4Q13439 2230 aaKnown RBP19.01■□□□□ 0.63
CLK1-211ENST00000481641 CBX4O00257 560 aa19■□□□□ 0.63
CLK1-211ENST00000481641 ALOX15BO15296 676 aa19■□□□□ 0.63
CLK1-211ENST00000481641 CAPNS1P04632 268 aa19■□□□□ 0.63
CLK1-211ENST00000481641 OR1E1P30953 314 aa19■□□□□ 0.63
CLK1-211ENST00000481641 CHRNA3P32297 505 aa19■□□□□ 0.63
CLK1-211ENST00000481641 SOX5P35711 763 aa19■□□□□ 0.63
CLK1-211ENST00000481641 TAS2R38P59533 333 aa19■□□□□ 0.63
CLK1-211ENST00000481641 CDO1Q16878 200 aa19■□□□□ 0.63
CLK1-211ENST00000481641 RBM43Q6ZSC3 357 aaKnown RBP19■□□□□ 0.63
CLK1-211ENST00000481641 PRPF39Q86UA1 669 aaKnown RBP19■□□□□ 0.63
CLK1-211ENST00000481641 OR2A12Q8NGT7 310 aa19■□□□□ 0.63
CLK1-211ENST00000481641 JOSD2Q8TAC2 188 aa19■□□□□ 0.63
CLK1-211ENST00000481641 RXFP2Q8WXD0 754 aa19■□□□□ 0.63
CLK1-211ENST00000481641 KLK6Q92876 244 aa19■□□□□ 0.63
CLK1-211ENST00000481641 ARRDC3Q96B67 414 aa19■□□□□ 0.63
CLK1-211ENST00000481641 SKA1Q96BD8 255 aa19■□□□□ 0.63
CLK1-211ENST00000481641 HAPLN3Q96S86 360 aa19■□□□□ 0.63
CLK1-211ENST00000481641 PCDHB18PQ96TA0 734 aa19■□□□□ 0.63
CLK1-211ENST00000481641 C11orf70Q9BRQ4 267 aa19■□□□□ 0.63
CLK1-211ENST00000481641 ZNF212Q9UDV6 495 aa19■□□□□ 0.63
CLK1-211ENST00000481641 SIK3Q9Y2K2 1263 aa19■□□□□ 0.63
CLK1-211ENST00000481641 ACTL7AQ9Y615 435 aa19■□□□□ 0.63
CLK1-211ENST00000481641 FREM2Q5SZK8 3169 aa19■□□□□ 0.63
CLK1-211ENST00000481641 TLR4O00206 839 aa18.99■□□□□ 0.63
CLK1-211ENST00000481641 KPNA3O00505 521 aaPredicted RBP18.99■□□□□ 0.63
CLK1-211ENST00000481641 SLC7A4O43246 635 aa18.99■□□□□ 0.63
CLK1-211ENST00000481641 TNFSF14O43557 240 aa18.99■□□□□ 0.63
CLK1-211ENST00000481641 DFNA5O60443 496 aa18.99■□□□□ 0.63
CLK1-211ENST00000481641 DKK1O94907 266 aa18.99■□□□□ 0.63
CLK1-211ENST00000481641 MMP8P22894 467 aa18.99■□□□□ 0.63
CLK1-211ENST00000481641 COPB1P53618 953 aaKnown RBP18.99■□□□□ 0.63
CLK1-211ENST00000481641 NXPH1P58417 271 aa18.99■□□□□ 0.63
CLK1-211ENST00000481641 BNIP3Q12983 259 aa18.99■□□□□ 0.63
CLK1-211ENST00000481641 CCDC14Q49A88 953 aa18.99■□□□□ 0.63
CLK1-211ENST00000481641 FKBP15Q5T1M5 1219 aa18.99■□□□□ 0.63
CLK1-211ENST00000481641 C6orf118Q5T5N4 469 aa18.99■□□□□ 0.63
CLK1-211ENST00000481641 PIP5KL1Q5T9C9 394 aa18.99■□□□□ 0.63
CLK1-211ENST00000481641 NAPEPLDQ6IQ20 393 aa18.99■□□□□ 0.63
CLK1-211ENST00000481641 ZNF677Q86XU0 584 aa18.99■□□□□ 0.63
CLK1-211ENST00000481641 SPATS2Q86XZ4 545 aaKnown RBP18.99■□□□□ 0.63
CLK1-211ENST00000481641 DRC7Q8IY82 874 aa18.99■□□□□ 0.63
CLK1-211ENST00000481641 DCAF4L2Q8NA75 395 aa18.99■□□□□ 0.63
CLK1-211ENST00000481641 KDM4CQ9H3R0 1056 aa18.99■□□□□ 0.63
CLK1-211ENST00000481641 GDF3Q9NR23 364 aa18.99■□□□□ 0.63
CLK1-211ENST00000481641 PKD1L2Q7Z442 2459 aa18.98■□□□□ 0.63
CLK1-211ENST00000481641 RNGTTO60942 597 aaKnown RBP18.98■□□□□ 0.63
CLK1-211ENST00000481641 ITGAVP06756 1048 aa18.98■□□□□ 0.63
CLK1-211ENST00000481641 TPM2P07951 284 aa18.98■□□□□ 0.63
CLK1-211ENST00000481641 SYCP1Q15431 976 aa18.98■□□□□ 0.63
CLK1-211ENST00000481641 SLC45A4Q5BKX6 768 aa18.98■□□□□ 0.63
CLK1-211ENST00000481641 ARSIQ5FYB1 569 aa18.98■□□□□ 0.63
CLK1-211ENST00000481641 C22orf39Q6P5X5 142 aa18.98■□□□□ 0.63
CLK1-211ENST00000481641 ARCQ7LC44 396 aa18.98■□□□□ 0.63
CLK1-211ENST00000481641 TMPRSS7Q7RTY8 843 aa18.98■□□□□ 0.63
CLK1-211ENST00000481641 TRIM69Q86WT6 500 aa18.98■□□□□ 0.63
CLK1-211ENST00000481641 GRIN3AQ8TCU5 1115 aa18.98■□□□□ 0.63
CLK1-211ENST00000481641 SAP25Q8TEE9 199 aa18.98■□□□□ 0.63
CLK1-211ENST00000481641 PCMTD1Q96MG8 357 aaPredicted RBP18.98■□□□□ 0.63
CLK1-211ENST00000481641 MYOCQ99972 504 aa18.98■□□□□ 0.63
CLK1-211ENST00000481641 ZYG11BQ9C0D3 744 aa18.98■□□□□ 0.63
CLK1-211ENST00000481641 FTSJ1Q9UET6 329 aa18.98■□□□□ 0.63
CLK1-211ENST00000481641 FARP1Q9Y4F1 1045 aaPredicted RBP18.98■□□□□ 0.63
CLK1-211ENST00000481641 ILVBLA1L0T0 632 aa18.97■□□□□ 0.63
CLK1-211ENST00000481641 FAM149AA5PLN7 773 aa18.97■□□□□ 0.63
CLK1-211ENST00000481641 ZNF821O75541 412 aaPredicted RBP18.97■□□□□ 0.63
CLK1-211ENST00000481641 ZMPSTE24O75844 475 aa18.97■□□□□ 0.63
CLK1-211ENST00000481641 PRLRP16471 622 aa18.97■□□□□ 0.63
CLK1-211ENST00000481641 STAT1P42224 750 aa18.97■□□□□ 0.63
CLK1-211ENST00000481641 PTP4A2Q12974 167 aa18.97■□□□□ 0.63
CLK1-211ENST00000481641 DPY19L3Q6ZPD9 716 aa18.97■□□□□ 0.63
CLK1-211ENST00000481641 EID2Q8N6I1 236 aa18.97■□□□□ 0.63
CLK1-211ENST00000481641 MFSD2AQ8NA29 543 aa18.97■□□□□ 0.63
CLK1-211ENST00000481641 ATP13A1Q9HD20 1204 aa18.97■□□□□ 0.63
CLK1-211ENST00000481641 NDFIP2Q9NV92 336 aa18.97■□□□□ 0.63
CLK1-211ENST00000481641 TPX2Q9ULW0 747 aaKnown RBP18.97■□□□□ 0.63
CLK1-211ENST00000481641 C2CD4BA6NLJ0 364 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 FAM72CH0Y354 149 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 SLC31A1O15431 190 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 UNGP13051 313 aaPredicted RBP18.96■□□□□ 0.63
CLK1-211ENST00000481641 EPHA8P29322 1005 aaPredicted RBP18.96■□□□□ 0.63
CLK1-211ENST00000481641 SDC4P31431 198 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 ADRA1BP35368 520 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 ACVRL1P37023 503 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 DNA2P51530 1060 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 CLDN6P56747 220 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 ARF5P84085 180 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms