RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 RERGQ96A58 199 aaPredicted RBP9.68□□□□□ -0.86
VEGFA-212ENST00000480614 KBTBD4Q9NVX7 518 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 H3BNH8 94 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 ATP9AO75110 1047 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 PPIBP23284 216 aaKnown RBP9.68□□□□□ -0.86
VEGFA-212ENST00000480614 RPL14P50914 215 aaKnown RBP9.68□□□□□ -0.86
VEGFA-212ENST00000480614 BNIPLQ7Z465 357 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 PEX5LQ8IYB4 626 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 CBWD1Q9BRT8 395 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 NFASCO94856 1347 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 SNAP23O00161 211 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 MRASO14807 208 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 CES1P23141 567 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 CCDC157Q569K6 752 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 CRELD2Q6UXH1 353 aaPredicted RBP9.68□□□□□ -0.86
VEGFA-212ENST00000480614 PPP3R2Q96LZ3 170 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 TEKT5Q96M29 485 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 RNPEPQ9H4A4 650 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 PRDM8Q9NQV8 689 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 AHCYL1O43865 530 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 SEC22BO75396 215 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 CSF1RP07333 972 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 GPD2P43304 727 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 BOP1Q14137 746 aaKnown RBP9.68□□□□□ -0.86
VEGFA-212ENST00000480614 SLC47A2Q86VL8 602 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 PJA1Q8NG27 643 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 TSPAN18Q96SJ8 248 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 MLPHQ9BV36 600 aaPredicted RBP9.68□□□□□ -0.86
VEGFA-212ENST00000480614 TBC1D30Q9Y2I9 924 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 A0A096LPK6 155 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 WDR27A2RRH5 827 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 RAG1P15918 1043 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 PPIDQ08752 370 aaKnown RBP9.68□□□□□ -0.86
VEGFA-212ENST00000480614 CBWD6Q4V339 395 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 ESRP1Q6NXG1 681 aaKnown RBP9.68□□□□□ -0.86
VEGFA-212ENST00000480614 FAM131BQ86XD5 332 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 PHC3Q8NDX5 983 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 ARL15Q9NXU5 204 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 ANKRD26Q9UPS8 1709 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 CCDC182A6NF36 153 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 SNAP91O60641 907 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 DAPK2Q9UIK4 370 aa9.68□□□□□ -0.86
VEGFA-212ENST00000480614 PDE2AO00408 941 aaPredicted RBP9.67□□□□□ -0.86
VEGFA-212ENST00000480614 HLA-DQA2P01906 255 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 ALDH2P05091 517 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 TSHRP16473 764 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 GRIK4Q16099 956 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 ZSWIM7Q19AV6 140 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 C4orf19Q8IY42 314 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 CCDC185Q8N715 623 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 CD101Q93033 1021 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 NDOR1Q9UHB4 597 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 TRAV19A0A0A6YYK7 116 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 FCHO1O14526 889 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 NAA30Q147X3 362 aaPredicted RBP9.67□□□□□ -0.86
VEGFA-212ENST00000480614 FNDC3BQ53EP0 1204 aaKnown RBP9.67□□□□□ -0.86
VEGFA-212ENST00000480614 IRGCQ6NXR0 463 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 HEATR4Q86WZ0 1026 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 SEPHS2Q99611 448 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 POLR1EQ9GZS1 481 aaKnown RBP9.67□□□□□ -0.86
VEGFA-212ENST00000480614 CYLDQ9NQC7 956 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 CDH9Q9ULB4 789 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 MLYCDO95822 493 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 FGFR1P11362 822 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 CASP4P49662 377 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 BROXQ5VW32 411 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 FBXO16Q8IX29 292 aaPredicted RBP9.67□□□□□ -0.86
VEGFA-212ENST00000480614 LPCAT1Q8NF37 534 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 PHF21BQ96EK2 531 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 MRPL57Q9BQC6 102 aaKnown RBP9.67□□□□□ -0.86
VEGFA-212ENST00000480614 ZNF214Q9UL59 606 aaPredicted RBP9.67□□□□□ -0.86
VEGFA-212ENST00000480614 INVSQ9Y283 1065 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 QSOX1O00391 747 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 ST3GAL1Q11201 340 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 MTM1Q13496 603 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 CRY1Q16526 586 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 TTI2Q6NXR4 508 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 GJD3Q8N144 294 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 SUCOQ9UBS9 1254 aaKnown RBP9.67□□□□□ -0.86
VEGFA-212ENST00000480614 FBXL21Q9UKT6 434 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 IQSEC2Q5JU85 1478 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 URADA6NGE7 173 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 CLCN3P51790 818 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 PABPC1LQ4VXU2 614 aaKnown RBP9.67□□□□□ -0.86
VEGFA-212ENST00000480614 AFTPHQ6ULP2 937 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 ZNF720Q7Z2F6 126 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 ZNF248Q8NDW4 579 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 KAT2BQ92831 832 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 MPP4Q96JB8 637 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 CCDC28BQ9BUN5 200 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 MRTO4Q9UKD2 239 aaKnown RBP9.67□□□□□ -0.86
VEGFA-212ENST00000480614 CCR3P51677 355 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 TTC23Q5W5X9 447 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 KATNAL2Q8IYT4 538 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 SMNDC1O75940 238 aaKnown RBP eCLIP9.67□□□□□ -0.864e-7■■□□□ 12.8
VEGFA-212ENST00000480614 GCNT1Q02742 428 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 ADARB2Q9NS39 739 aaKnown RBP9.67□□□□□ -0.86
VEGFA-212ENST00000480614 DDX20Q9UHI6 824 aaKnown RBP9.67□□□□□ -0.86
VEGFA-212ENST00000480614 SYNPO2Q9UMS6 1093 aa9.67□□□□□ -0.86
VEGFA-212ENST00000480614 UBOX5O94941 541 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms