RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 FAM46CQ5VWP2 391 aa12.24□□□□□ -0.45
USP11-208ENST00000480104 RNF219Q5W0B1 726 aaPredicted RBP12.24□□□□□ -0.45
USP11-208ENST00000480104 CBWD2Q8IUF1 395 aa12.24□□□□□ -0.45
USP11-208ENST00000480104 GPD1LQ8N335 351 aa12.24□□□□□ -0.45
USP11-208ENST00000480104 Q8N9G6 341 aaPredicted RBP12.24□□□□□ -0.45
USP11-208ENST00000480104 FIBINQ8TAL6 211 aa12.24□□□□□ -0.45
USP11-208ENST00000480104 ACCSQ96QU6 501 aa12.24□□□□□ -0.45
USP11-208ENST00000480104 REPIN1Q9BWE0 567 aaKnown RBP12.24□□□□□ -0.45
USP11-208ENST00000480104 SLC29A3Q9BZD2 475 aa12.24□□□□□ -0.45
USP11-208ENST00000480104 SDCBP2Q9H190 292 aa12.24□□□□□ -0.45
USP11-208ENST00000480104 FOXP1Q9H334 677 aaPredicted RBP12.24□□□□□ -0.45
USP11-208ENST00000480104 PNPLA8Q9NP80 782 aa12.24□□□□□ -0.45
USP11-208ENST00000480104 NOL7Q9UMY1 257 aaKnown RBP12.24□□□□□ -0.45
USP11-208ENST00000480104 NAALADL1Q9UQQ1 740 aa12.24□□□□□ -0.45
USP11-208ENST00000480104 RECQLP46063 649 aaPredicted RBP12.23□□□□□ -0.45
USP11-208ENST00000480104 RABIFP47224 123 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 COPB1P53618 953 aaKnown RBP12.23□□□□□ -0.45
USP11-208ENST00000480104 PTK2BQ14289 1009 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 MCM6Q14566 821 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 INPP5JQ15735 1006 aaPredicted RBP12.23□□□□□ -0.45
USP11-208ENST00000480104 NADK2Q4G0N4 442 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 EFHC2Q5JST6 749 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 PIK3R6Q5UE93 754 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 C16orf46Q6P387 395 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 NEK5Q6P3R8 708 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 UNC5BQ8IZJ1 945 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 ZNF557Q8N988 423 aaPredicted RBP12.23□□□□□ -0.45
USP11-208ENST00000480104 PCDH19Q8TAB3 1148 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 FAM174AQ8TBP5 190 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 BTN2A2Q8WVV5 523 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 OR8D1Q8WZ84 308 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 STARD8Q92502 1023 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 KIAA1143Q96AT1 154 aaPredicted RBP12.23□□□□□ -0.45
USP11-208ENST00000480104 TAAR9Q96RI9 348 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 TM6SF1Q9BZW5 370 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 CLPBQ9H078 707 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 SEMA6CQ9H3T2 930 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 KCTD3Q9Y597 815 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 PCDHGA3Q9Y5H0 932 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 B3GALT1Q9Y5Z6 326 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 USP3Q9Y6I4 520 aa12.23□□□□□ -0.45
USP11-208ENST00000480104 CROCCQ5TZA2 2017 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 GOLGA6L7A0A1B0GV03 622 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 C1QTNF3-AMACRE9PGA6 284 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 RAD51BO15315 384 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 STAU1O95793 577 aaKnown RBP12.22□□□□□ -0.45
USP11-208ENST00000480104 LATS1O95835 1130 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 SLFN14P0C7P3 912 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 DLATP10515 647 aaKnown RBP12.22□□□□□ -0.45
USP11-208ENST00000480104 TSHRP16473 764 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 LEPRP48357 1165 aaKnown RBP12.22□□□□□ -0.45
USP11-208ENST00000480104 NUMBP49757 651 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 TOB1P50616 345 aaPredicted RBP12.22□□□□□ -0.45
USP11-208ENST00000480104 SURF1Q15526 300 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 TMEM259Q4ZIN3 620 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 FSCBQ5H9T9 825 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 XYLT1Q86Y38 959 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 PHACTR4Q8IZ21 702 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 SYCP3Q8IZU3 236 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 FRS2Q8WU20 508 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 ELMO3Q96BJ8 720 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 PRICKLE1Q96MT3 831 aaPredicted RBP12.22□□□□□ -0.45
USP11-208ENST00000480104 HAPLN3Q96S86 360 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 SRRTQ9BXP5 876 aaKnown RBP12.22□□□□□ -0.45
USP11-208ENST00000480104 BLOC1S4Q9NUP1 217 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 AKAP7Q9P0M2 348 aaPredicted RBP12.22□□□□□ -0.45
USP11-208ENST00000480104 PNMA8BQ9ULN7 279 aaPredicted RBP12.22□□□□□ -0.45
USP11-208ENST00000480104 PCDHB13Q9Y5F0 798 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 HS3ST3A1Q9Y663 406 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 POLEQ07864 2286 aa12.22□□□□□ -0.45
USP11-208ENST00000480104 LOC101059948A0A1B0GTJ6 334 aa12.21□□□□□ -0.45
USP11-208ENST00000480104 ZNF233A6NK53 670 aa12.21□□□□□ -0.45
USP11-208ENST00000480104 RFPL1O75677 317 aa12.21□□□□□ -0.45
USP11-208ENST00000480104 CLSTN1O94985 981 aa12.21□□□□□ -0.45
USP11-208ENST00000480104 PCDH8O95206 1070 aa12.21□□□□□ -0.45
USP11-208ENST00000480104 FGF3P11487 239 aaPredicted RBP12.21□□□□□ -0.45
USP11-208ENST00000480104 CASP5P51878 434 aa12.21□□□□□ -0.45
USP11-208ENST00000480104 NDST1P52848 882 aa12.21□□□□□ -0.45
USP11-208ENST00000480104 YWHAGP61981 247 aaKnown RBP eCLIP12.21□□□□□ -0.45
USP11-208ENST00000480104 TRPC3Q13507 836 aa12.21□□□□□ -0.45
USP11-208ENST00000480104 CDH18Q13634 790 aa12.21□□□□□ -0.45
USP11-208ENST00000480104 TCEA2Q15560 299 aa12.21□□□□□ -0.45
USP11-208ENST00000480104 FAM133BQ5BKY9 247 aaKnown RBP12.21□□□□□ -0.45
USP11-208ENST00000480104 SP5Q6BEB4 398 aaPredicted RBP12.21□□□□□ -0.45
USP11-208ENST00000480104 CARNMT1Q8N4J0 409 aa12.21□□□□□ -0.45
USP11-208ENST00000480104 HJURPQ8NCD3 748 aaPredicted RBP12.21□□□□□ -0.45
USP11-208ENST00000480104 MYEOVQ96EZ4 313 aa12.21□□□□□ -0.45
USP11-208ENST00000480104 INTS2Q9H0H0 1204 aaKnown RBP12.21□□□□□ -0.45
USP11-208ENST00000480104 RUBCNLQ9H714 662 aa12.21□□□□□ -0.45
USP11-208ENST00000480104 MRPL44Q9H9J2 332 aaKnown RBP12.21□□□□□ -0.45
USP11-208ENST00000480104 CYP4F12Q9HCS2 524 aa12.21□□□□□ -0.45
USP11-208ENST00000480104 FOXD4L1Q9NU39 408 aa12.21□□□□□ -0.45
USP11-208ENST00000480104 TBC1D7Q9P0N9 293 aa12.21□□□□□ -0.45
USP11-208ENST00000480104 MAP10Q9P2G4 905 aa12.21□□□□□ -0.45
USP11-208ENST00000480104 TLK1Q9UKI8 766 aa12.21□□□□□ -0.45
USP11-208ENST00000480104 HBS1LQ9Y450 684 aaKnown RBP12.21□□□□□ -0.45
USP11-208ENST00000480104 ZNF469Q96JG9 3925 aaPredicted RBP12.21□□□□□ -0.46
USP11-208ENST00000480104 PKDREJQ9NTG1 2253 aa12.21□□□□□ -0.46
USP11-208ENST00000480104 JMJD1CQ15652 2540 aa12.2□□□□□ -0.46
USP11-208ENST00000480104 ATRQ13535 2644 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms