RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 LIMK2P53671 638 aa19.51■□□□□ 0.71
TNFRSF8-204ENST00000479933 MAPRE1Q15691 268 aaKnown RBP19.51■□□□□ 0.71
TNFRSF8-204ENST00000479933 ANKRD20A4Q4UJ75 823 aa19.51■□□□□ 0.71
TNFRSF8-204ENST00000479933 C16orf46Q6P387 395 aa19.51■□□□□ 0.71
TNFRSF8-204ENST00000479933 RINLQ6ZS11 566 aa19.51■□□□□ 0.71
TNFRSF8-204ENST00000479933 LINC00523Q86TU6 105 aa19.51■□□□□ 0.71
TNFRSF8-204ENST00000479933 RASAL3Q86YV0 1011 aa19.51■□□□□ 0.71
TNFRSF8-204ENST00000479933 TMPRSS6Q8IU80 811 aa19.51■□□□□ 0.71
TNFRSF8-204ENST00000479933 ST13P4Q8IZP2 240 aaPredicted RBP19.51■□□□□ 0.71
TNFRSF8-204ENST00000479933 NAT14Q8WUY8 206 aa19.51■□□□□ 0.71
TNFRSF8-204ENST00000479933 EDEM1Q92611 657 aa19.51■□□□□ 0.71
TNFRSF8-204ENST00000479933 TEKT5Q96M29 485 aa19.51■□□□□ 0.71
TNFRSF8-204ENST00000479933 RILPQ96NA2 401 aa19.51■□□□□ 0.71
TNFRSF8-204ENST00000479933 FCRL3Q96P31 734 aaPredicted RBP19.51■□□□□ 0.71
TNFRSF8-204ENST00000479933 DNAJB4Q9UDY4 337 aa19.51■□□□□ 0.71
TNFRSF8-204ENST00000479933 TAGLN3Q9UI15 199 aa19.51■□□□□ 0.71
TNFRSF8-204ENST00000479933 CTSHP09668 335 aa19.5■□□□□ 0.71
TNFRSF8-204ENST00000479933 HADHAP40939 763 aa19.5■□□□□ 0.71
TNFRSF8-204ENST00000479933 AFF1P51825 1210 aaKnown RBP19.5■□□□□ 0.71
TNFRSF8-204ENST00000479933 RABGGTBP53611 331 aa19.5■□□□□ 0.71
TNFRSF8-204ENST00000479933 CSE1LP55060 971 aaKnown RBP19.5■□□□□ 0.71
TNFRSF8-204ENST00000479933 IRX4P78413 519 aa19.5■□□□□ 0.71
TNFRSF8-204ENST00000479933 MGAT3Q09327 533 aa19.5■□□□□ 0.71
TNFRSF8-204ENST00000479933 PCLAFQ15004 111 aa19.5■□□□□ 0.71
TNFRSF8-204ENST00000479933 HSF5Q4G112 596 aaPredicted RBP19.5■□□□□ 0.71
TNFRSF8-204ENST00000479933 TEDDM1Q5T9Z0 273 aa19.5■□□□□ 0.71
TNFRSF8-204ENST00000479933 NAPEPLDQ6IQ20 393 aa19.5■□□□□ 0.71
TNFRSF8-204ENST00000479933 KBTBD2Q8IY47 623 aa19.5■□□□□ 0.71
TNFRSF8-204ENST00000479933 STMN2Q93045 179 aa19.5■□□□□ 0.71
TNFRSF8-204ENST00000479933 RNF34Q969K3 372 aa19.5■□□□□ 0.71
TNFRSF8-204ENST00000479933 TSGA13Q96PP4 275 aa19.5■□□□□ 0.71
TNFRSF8-204ENST00000479933 UPF3AQ9H1J1 476 aaKnown RBP19.5■□□□□ 0.71
TNFRSF8-204ENST00000479933 SNX15Q9NRS6 342 aa19.5■□□□□ 0.71
TNFRSF8-204ENST00000479933 NSMCE4AQ9NXX6 385 aa19.5■□□□□ 0.71
TNFRSF8-204ENST00000479933 ARHGAP42A6NI28 874 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 TIMM44O43615 452 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 LRIG2O94898 1065 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 KITP10721 976 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 CD68P34810 354 aaPredicted RBP19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 ZNF157P51786 506 aaPredicted RBP19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 RPL10AP62906 217 aaKnown RBP19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 ITGA9Q13797 1035 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 CXCL17Q6UXB2 119 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 ZCCHC23Q6ZST2 131 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 STRA8Q7Z7C7 330 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 TAC4Q86UU9 113 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 SREK1Q8WXA9 508 aaKnown RBP19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 UROC1Q96N76 676 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 RTP3Q9BQQ7 232 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 C20orf27Q9GZN8 174 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 ZNF395Q9H8N7 513 aaPredicted RBP19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 ARMCX1Q9P291 453 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 ZCWPW2A0A1B0GU75 182 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 SPECC1L-ADORA2AF8WAN1 911 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 MAGEC1O60732 1142 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 TOP3BO95985 862 aaKnown RBP19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 NFKB1P19838 968 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 TMEM259Q4ZIN3 620 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 CST9Q5W186 159 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 CES3Q6UWW8 571 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 MLPHQ9BV36 600 aaPredicted RBP19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 ZFYVE28Q9HCC9 887 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 COPG2Q9UBF2 871 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 MARCOQ9UEW3 520 aaPredicted RBP19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 SOX13Q9UN79 622 aa19.49■□□□□ 0.71
TNFRSF8-204ENST00000479933 F8W8V4 182 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 AMHP03971 560 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 SRGAP2BP0DMP2 458 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 CDH17Q12864 832 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 ZBTB17Q13105 803 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 DNAL1Q4LDG9 190 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 BRMS1LQ5PSV4 323 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 KLHDC8BQ8IXV7 354 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 THEM5Q8N1Q8 247 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 DCLK2Q8N568 766 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 TRPV1Q8NER1 839 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 DQX1Q8TE96 717 aaKnown RBP19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 PPP1R2P1Q96PQ5 205 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 TUBGCP5Q96RT8 1024 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 CCDC106Q9BWC9 280 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 HSFX1Q9UBD0 423 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 DNAJC16Q9Y2G8 782 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 TDRD15B5MCY1 1934 aaKnown RBP19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 B2RBV5 119 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 M0QZQ0 153 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 PFDN1O60925 122 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 USP12O75317 370 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 UBTFL6P0CB48 400 aaPredicted RBP19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 MYL4P12829 197 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 CPA3P15088 417 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 KCNA4P22459 653 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 BDNFP23560 247 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 PGM1P36871 562 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 MFSD14CQ5VZR4 134 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 KLC3Q6P597 504 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 IFNL1Q8IU54 200 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 PTTG2Q9NZH5 202 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 MID2Q9UJV3 735 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 WDR37Q9Y2I8 494 aa19.48■□□□□ 0.71
TNFRSF8-204ENST00000479933 AAR2Q9Y312 384 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms