RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 SGK2Q9HBY8 427 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 STIM2Q9P246 746 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 TJP2Q9UDY2 1190 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.86□□□□□ -1.31
VCP-205ENST00000479300 DNAI1Q9UI46 699 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 LCMT1Q9UIC8 334 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 GGA2Q9UJY4 613 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 STOML2Q9UJZ1 356 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 INTS6Q9UL03 887 aaKnown RBP6.86□□□□□ -1.31
VCP-205ENST00000479300 NCKAP1Q9Y2A7 1128 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 DOCK9Q9BZ29 2069 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 GOLGA6L7A0A1B0GV03 622 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 A0A1W2PNU3 283 aaPredicted RBP6.85□□□□□ -1.31
VCP-205ENST00000479300 A0A1W2PP55 124 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 FAM47DPA6NHR8 397 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 USP27XA6NNY8 438 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 GOLGA6L19H0YKK7 550 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 RNF225M0QZC1 329 aaPredicted RBP6.85□□□□□ -1.31
VCP-205ENST00000479300 ERVH48-1M5A8F1 160 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 TRIM38O00635 465 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 POLR3GO15318 223 aaPredicted RBP6.85□□□□□ -1.31
VCP-205ENST00000479300 MID1O15344 667 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 MSI1O43347 362 aaKnown RBP6.85□□□□□ -1.31
VCP-205ENST00000479300 DFNA5O60443 496 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 SIN3BO75182 1162 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 MOCS2O96007 188 aaPredicted RBP6.85□□□□□ -1.31
VCP-205ENST00000479300 DNTTP04053 509 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 ASLP04424 464 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 ITGAVP06756 1048 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 DLDP09622 509 aaKnown RBP6.85□□□□□ -1.31
VCP-205ENST00000479300 SLC2A3P11169 496 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 PABPC1P11940 636 aaKnown RBP6.85□□□□□ -1.31
VCP-205ENST00000479300 GLDCP23378 1020 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 CD38P28907 300 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 SLC6A4P31645 630 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 NNMTP40261 264 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 ZNF165P49910 485 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 C21orf59P57076 290 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 NXPH1P58417 271 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 PPP2CBP62714 309 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 PPP2CAP67775 309 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 CDK17Q00537 523 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 MTA1Q13330 715 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 CDH18Q13634 790 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 MEA1Q16626 185 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 PROX2Q3B8N5 592 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 INAVAQ3KP66 663 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 FAM133BQ5BKY9 247 aaKnown RBP6.85□□□□□ -1.31
VCP-205ENST00000479300 EFHC1Q5JVL4 640 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 MPP7Q5T2T1 576 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 C9orf64Q5T6V5 341 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 ZNF776Q68DI1 518 aaPredicted RBP6.85□□□□□ -1.31
VCP-205ENST00000479300 RFWD3Q6PCD5 774 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 USP30Q70CQ3 517 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 ADAT2Q7Z6V5 191 aaKnown RBP6.85□□□□□ -1.31
VCP-205ENST00000479300 PACS2Q86VP3 889 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 MFN1Q8IWA4 741 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 CARNMT1Q8N4J0 409 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 AADATQ8N5Z0 425 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 FAM181AQ8N9Y4 354 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 MSANTD4Q8NCY6 345 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 LMO3Q8TAP4 145 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 GANCQ8TET4 914 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 STK32AQ8WU08 396 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 BAP1Q92560 729 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 KAT5Q92993 513 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 AZIN2Q96A70 460 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 ZBTB9Q96C00 473 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 NAF1Q96HR8 494 aaKnown RBP6.85□□□□□ -1.31
VCP-205ENST00000479300 FAM129BQ96TA1 746 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 CRACR2AQ9BSW2 395 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 THAP9Q9H5L6 903 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 FAM204AQ9H8W3 233 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 FBXL12Q9NXK8 326 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 ADAMTS1Q9UHI8 967 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 TLR6Q9Y2C9 796 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 TEX15Q9BXT5 2789 aa6.85□□□□□ -1.31
VCP-205ENST00000479300 A0A087WUV0 522 aaPredicted RBP6.84□□□□□ -1.31
VCP-205ENST00000479300 LY6G6EA0A0G2JKS1 128 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 GTPBP10A4D1E9 387 aaKnown RBP6.84□□□□□ -1.31
VCP-205ENST00000479300 PMS2P1A4D2B8 440 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 EIF3CLB5ME19 914 aaKnown RBP6.84□□□□□ -1.31
VCP-205ENST00000479300 B8ZZF3 427 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 F5H5T6 163 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 TLR4O00206 839 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 ARHGAP6O43182 974 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 LATO43561 262 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 SIGLEC6O43699 453 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 SDC3O75056 442 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 GIMD1P0DJR0 217 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 MYF5P13349 255 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 CKMT2P17540 419 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 SLC9A1P19634 815 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 ABCB4P21439 1286 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 BMP6P22004 513 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 ACP1P24666 158 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 CTSOP43234 321 aaPredicted RBP6.84□□□□□ -1.31
VCP-205ENST00000479300 GPD2P43304 727 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 RXRGP48443 463 aa6.84□□□□□ -1.31
VCP-205ENST00000479300 CCR5P51681 352 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms