RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 DDX10Q13206 875 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 SLC14A1Q13336 389 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 TRPC3Q13507 836 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 SLC12A1Q13621 1099 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 SEMA3AQ14563 771 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 RETSATQ6NUM9 610 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 ZNF793Q6ZN11 406 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 SYT13Q7L8C5 426 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 PIP4P1Q86T03 277 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 C12orf76Q8N812 135 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 SEC62Q99442 399 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 RNF26Q9BY78 433 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 UBN1Q9NPG3 1134 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 IFT80Q9P2H3 777 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 BAG5Q9UL15 447 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 DNAJC16Q9Y2G8 782 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 RRP7AQ9Y3A4 280 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 ERVK-7P63135 1459 aa4.48□□□□□ -1.69
CDC42BPA-212ENST00000478573 PTPRTO14522 1441 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 ABCC5O15440 1437 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 ARHGAP31Q2M1Z3 1444 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 ADGRB3O60242 1522 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 C3orf70A6NLC5 250 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 HMGB1P1B2RPK0 211 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 B4DGG1 531 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 CTSAP10619 480 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 XBP1P17861 261 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 IGFBP2P18065 325 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 TACR3P29371 465 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 RAE1P78406 368 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 MPP1Q00013 466 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 CFHR3Q02985 330 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 SIM2Q14190 667 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 SLC4A8Q2Y0W8 1093 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 ANKRD40Q6AI12 368 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 PTGR2Q8N8N7 351 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 PPHLN1Q8NEY8 458 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 HTRA1Q92743 480 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 TRMT61AQ96FX7 289 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 PRR11Q96HE9 360 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 KAZALD1Q96I82 304 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 PIGSQ96S52 555 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 REEP2Q9BRK0 252 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 SCNM1Q9BWG6 230 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 FAM234AQ9H0X4 552 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 PRDM16Q9HAZ2 1276 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 ABHD10Q9NUJ1 306 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 SEMA5BQ9P283 1151 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 TRPC5Q9UL62 973 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 FZD4Q9ULV1 537 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 RPRD2Q5VT52 1461 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 STRCP1A6NGW2 1772 aa4.47□□□□□ -1.69
CDC42BPA-212ENST00000478573 LTBP4Q8N2S1 1624 aa4.46□□□□□ -1.69
CDC42BPA-212ENST00000478573 IFT172Q9UG01 1749 aa4.46□□□□□ -1.69
CDC42BPA-212ENST00000478573 CHD2O14647 1828 aaKnown RBP4.46□□□□□ -1.69
CDC42BPA-212ENST00000478573 KIF15Q9NS87 1388 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 CYP3A7-CYP3A51PA0A087WV96 503 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 VWA3AA6NCI4 1184 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 STX16-NPEPL1H3BU86 382 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 STX16O14662 325 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 FYB1O15117 783 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 PRAMEF2O60811 474 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 TULP3O75386 442 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 ATF7P17544 494 aaPredicted RBP4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 CYP3A7P24462 503 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 LIFRP42702 1097 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 JAK3P52333 1124 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 TAS2R50P59544 299 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 NANOS2P60321 138 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 G3BP1Q13283 466 aaKnown RBP eCLIP4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 PDCLQ13371 301 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 STIM1Q13586 685 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 KPNB1Q14974 876 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 DLGAP5Q15398 846 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 PFKFB3Q16875 520 aaPredicted RBP4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 ZNF484Q5JVG2 852 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 DAB2IPQ5VWQ8 1189 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 ATG16L1Q676U5 607 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 WDR93Q6P2C0 686 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 ZNF549Q6P9A3 640 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 TMED8Q6PL24 325 aaPredicted RBP4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 DEF8Q6ZN54 512 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 C9orf47Q6ZRZ4 202 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 TSPYL6Q8N831 410 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 FAM71DQ8N9W8 422 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 FSIP1Q8NA03 581 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 PCYOX1LQ8NBM8 494 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 SKA1Q96BD8 255 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 ZFYVE19Q96K21 471 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 LYZL4Q96KX0 146 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 SENP7Q9BQF6 1050 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 TRMOQ9BU70 441 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 HIPK2Q9H2X6 1198 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 JMJD4Q9H9V9 463 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 RAB21Q9UL25 225 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 SLC12A4Q9UP95 1085 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 PCDHB2Q9Y5E7 798 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 NOTCH4Q99466 2003 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms