RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 HMCESQ96FZ2 354 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 MAK16Q9BXY0 300 aaKnown RBP11.72□□□□□ -0.53
CBWD3-206ENST00000478048 OSBPL8Q9BZF1 889 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 MAGEH1Q9H213 219 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 MFSD1Q9H3U5 465 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 LMAN1LQ9HAT1 526 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 ATP13A1Q9HD20 1204 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 VPS28Q9UK41 221 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 MRPS17Q9Y2R5 130 aaKnown RBP11.72□□□□□ -0.53
CBWD3-206ENST00000478048 JRKLQ9Y4A0 524 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 ACTL7AQ9Y615 435 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 SHROOM3Q8TF72 1996 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 APOL1O14791 398 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 PI15O43692 258 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 CST8O60676 142 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 ZMPSTE24O75844 475 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 DCNP07585 359 aaKnown RBP11.72□□□□□ -0.53
CBWD3-206ENST00000478048 POLR2EP19388 210 aaKnown RBP11.72□□□□□ -0.53
CBWD3-206ENST00000478048 TNFRSF4P43489 277 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 STK19P49842 368 aaPredicted RBP11.72□□□□□ -0.53
CBWD3-206ENST00000478048 NDST2P52849 883 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 OXCT1P55809 520 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 PAFAH1B3Q15102 231 aaKnown RBP11.72□□□□□ -0.53
CBWD3-206ENST00000478048 PPP2R5EQ16537 467 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 PREPLQ4J6C6 727 aaPredicted RBP11.72□□□□□ -0.53
CBWD3-206ENST00000478048 C2orf27AQ580R0 203 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 EGFLAMQ63HQ2 1017 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 IL31Q6EBC2 164 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 PKN3Q6P5Z2 889 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 ZNF783Q6ZMS7 281 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 LEKR1Q6ZMV7 388 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 CCDC105Q8IYK2 499 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.72□□□□□ -0.53
CBWD3-206ENST00000478048 EXOC4Q96A65 974 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 TTC17Q96AE7 1141 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 RPL10LQ96L21 214 aaKnown RBP11.72□□□□□ -0.53
CBWD3-206ENST00000478048 ACOX2Q99424 681 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 ACE2Q9BYF1 805 aaPredicted RBP11.72□□□□□ -0.53
CBWD3-206ENST00000478048 SAE1Q9UBE0 346 aaPredicted RBP11.72□□□□□ -0.53
CBWD3-206ENST00000478048 VPS51Q9UID3 782 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 STARD13Q9Y3M8 1113 aa11.72□□□□□ -0.53
CBWD3-206ENST00000478048 TCRBV7S2A1N4TA0A589 114 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 WASH3PC4AMC7 463 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 CBX4O00257 560 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 DFFAO00273 331 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 MT-CO1P00395 513 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 PAPOLAP51003 745 aaKnown RBP11.71□□□□□ -0.54
CBWD3-206ENST00000478048 YBEYP58557 167 aaPredicted RBP11.71□□□□□ -0.54
CBWD3-206ENST00000478048 ARF5P84085 180 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 SERINC3Q13530 473 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 GAS6Q14393 721 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 DMC1Q14565 340 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 EIF4HQ15056 248 aaKnown RBP11.71□□□□□ -0.54
CBWD3-206ENST00000478048 PTPRNQ16849 979 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 LCE2AQ5TA79 106 aaPredicted RBP11.71□□□□□ -0.54
CBWD3-206ENST00000478048 LINGO4Q6UY18 593 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 ZNF354CQ86Y25 554 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 LZTR1Q8N653 840 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 DCAF4L2Q8NA75 395 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 HAUS1Q96CS2 278 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 MYO19Q96H55 970 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 MRGPRX3Q96LB0 322 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 NELL2Q99435 816 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 POLR3BQ9NW08 1133 aaPredicted RBP11.71□□□□□ -0.54
CBWD3-206ENST00000478048 DTLQ9NZJ0 730 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 SLCO3A1Q9UIG8 710 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 SIT1Q9Y3P8 196 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 HEY1Q9Y5J3 304 aa11.71□□□□□ -0.54
CBWD3-206ENST00000478048 MUC22E2RYF6 1773 aaPredicted RBP11.7□□□□□ -0.54
CBWD3-206ENST00000478048 FAM86C2PA6NEL3 165 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 J3KR12 359 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 CD160O95971 181 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 DLDP09622 509 aaKnown RBP11.7□□□□□ -0.54
CBWD3-206ENST00000478048 PECAM1P16284 738 aaPredicted RBP11.7□□□□□ -0.54
CBWD3-206ENST00000478048 JUNDP17535 347 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 MSNP26038 577 aaKnown RBP11.7□□□□□ -0.54
CBWD3-206ENST00000478048 PTPN7P35236 360 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 SERPINB6P35237 376 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 DEKP35659 375 aaKnown RBP11.7□□□□□ -0.54
CBWD3-206ENST00000478048 WASP42768 502 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 PARP15Q460N3 678 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 FBXO43Q4G163 708 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 DGKKQ5KSL6 1271 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 BBS12Q6ZW61 710 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 B4GALNT4Q76KP1 1039 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 ZNF366Q8N895 744 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 ZNF513Q8N8E2 541 aaPredicted RBP11.7□□□□□ -0.54
CBWD3-206ENST00000478048 RPLP0P6Q8NHW5 317 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 USP33Q8TEY7 942 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 UBE2Q2Q8WVN8 375 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 CARD9Q9H257 536 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 DONSONQ9NYP3 566 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 THAP10Q9P2Z0 257 aaPredicted RBP11.7□□□□□ -0.54
CBWD3-206ENST00000478048 ERVW-1Q9UQF0 538 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 CACNA1IQ9P0X4 2223 aa11.7□□□□□ -0.54
CBWD3-206ENST00000478048 ARHGAP42A6NI28 874 aa11.69□□□□□ -0.54
CBWD3-206ENST00000478048 K7ERQ8 282 aa11.69□□□□□ -0.54
CBWD3-206ENST00000478048 TIMM44O43615 452 aa11.69□□□□□ -0.54
CBWD3-206ENST00000478048 KDELR3O43731 214 aa11.69□□□□□ -0.54
CBWD3-206ENST00000478048 ATP5BP06576 529 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms