RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 C2orf49Q9BVC5 232 aaPredicted RBP16.21■□□□□ 0.19
COPS3-207ENST00000477299 MAK16Q9BXY0 300 aaKnown RBP16.21■□□□□ 0.19
COPS3-207ENST00000477299 TNKS2Q9H2K2 1166 aa16.21■□□□□ 0.19
COPS3-207ENST00000477299 PDFQ9HBH1 243 aa16.21■□□□□ 0.19
COPS3-207ENST00000477299 PRSS16Q9NQE7 514 aa16.21■□□□□ 0.19
COPS3-207ENST00000477299 DTLQ9NZJ0 730 aa16.21■□□□□ 0.19
COPS3-207ENST00000477299 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.21■□□□□ 0.19
COPS3-207ENST00000477299 HEY1Q9Y5J3 304 aa16.21■□□□□ 0.19
COPS3-207ENST00000477299 ARHGAP42A6NI28 874 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 MIF4GDA9UHW6 222 aaKnown RBP16.2■□□□□ 0.18
COPS3-207ENST00000477299 K7ESF4 209 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 APOL1O14791 398 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 FANCGO15287 622 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 SIN3BO75182 1162 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 SRPRAP08240 638 aaKnown RBP16.2■□□□□ 0.18
COPS3-207ENST00000477299 CXCL12P48061 93 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 SULT2A1Q06520 285 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 NUMA1Q14980 2115 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 RPS6KA1Q15418 735 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 CYTH1Q15438 398 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 ACCSLQ4AC99 568 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 C1orf210Q8IVY1 113 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 UBL4BQ8N7F7 174 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 ATP11CQ8NB49 1132 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 TRIM58Q8NG06 486 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 KCNV2Q8TDN2 545 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 ACDQ96AP0 544 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 RBM41Q96IZ5 413 aaKnown RBP16.2■□□□□ 0.18
COPS3-207ENST00000477299 WDR24Q96S15 920 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 OSBPL8Q9BZF1 889 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 C10orf88Q9H8K7 445 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 IPO11Q9UI26 975 aaKnown RBP16.2■□□□□ 0.18
COPS3-207ENST00000477299 SLC25A13Q9UJS0 675 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 HS3ST2Q9Y278 367 aa16.2■□□□□ 0.18
COPS3-207ENST00000477299 DOCK9Q9BZ29 2069 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 ZNF487B1APH4 448 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 ATP9BO43861 1147 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 BNIP3LO60238 219 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 MAFKO60675 156 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 PRAMEF11O60813 436 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 GJB3O75712 270 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 PEX11BO96011 259 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 ATP1A1P05023 1023 aaKnown RBP16.19■□□□□ 0.18
COPS3-207ENST00000477299 TDGF1P13385 188 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 CXCR5P32302 372 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 ETFBP38117 255 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 GALNT2Q10471 571 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 HNRNPA1L2Q32P51 320 aaKnown RBP16.19■□□□□ 0.18
COPS3-207ENST00000477299 EOGTQ5NDL2 527 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 C9orf64Q5T6V5 341 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 HEATR6Q6AI08 1181 aaKnown RBP16.19■□□□□ 0.18
COPS3-207ENST00000477299 Q6ZVU0 165 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 VSIG1Q86XK7 387 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 CACUL1Q86Y37 369 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 LZTR1Q8N653 840 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 CHST14Q8NCH0 376 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.19■□□□□ 0.18
COPS3-207ENST00000477299 VOPP1Q96AW1 172 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 ZNF419Q96HQ0 510 aaPredicted RBP16.19■□□□□ 0.18
COPS3-207ENST00000477299 NSMCE3Q96MG7 304 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 ALS2CR12Q96Q35 445 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 FAM129BQ96TA1 746 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 LGMNQ99538 433 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 CD93Q9NPY3 652 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 CEP192Q8TEP8 1941 aa16.19■□□□□ 0.18
COPS3-207ENST00000477299 TCRBV21S2A2A0A5A6 115 aa16.18■□□□□ 0.18
COPS3-207ENST00000477299 TTC24A2A3L6 582 aaPredicted RBP16.18■□□□□ 0.18
COPS3-207ENST00000477299 KCNK3O14649 394 aa16.18■□□□□ 0.18
COPS3-207ENST00000477299 ATG13O75143 517 aa16.18■□□□□ 0.18
COPS3-207ENST00000477299 MAGEA9P43362 315 aa16.18■□□□□ 0.18
COPS3-207ENST00000477299 RGRP47804 291 aa16.18■□□□□ 0.18
COPS3-207ENST00000477299 SERPINH1P50454 418 aaKnown RBP16.18■□□□□ 0.18
COPS3-207ENST00000477299 COPAP53621 1224 aa16.18■□□□□ 0.18
COPS3-207ENST00000477299 ST8SIA6P61647 398 aa16.18■□□□□ 0.18
COPS3-207ENST00000477299 CSTF1Q05048 431 aaKnown RBP16.18■□□□□ 0.18
COPS3-207ENST00000477299 SLC10A7Q0GE19 358 aa16.18■□□□□ 0.18
COPS3-207ENST00000477299 PPP2R5EQ16537 467 aa16.18■□□□□ 0.18
COPS3-207ENST00000477299 ATXN7L2Q5T6C5 722 aaPredicted RBP16.18■□□□□ 0.18
COPS3-207ENST00000477299 SDE2Q6IQ49 451 aa16.18■□□□□ 0.18
COPS3-207ENST00000477299 BBS12Q6ZW61 710 aa16.18■□□□□ 0.18
COPS3-207ENST00000477299 ADAT2Q7Z6V5 191 aaKnown RBP16.18■□□□□ 0.18
COPS3-207ENST00000477299 STK40Q8N2I9 435 aa16.18■□□□□ 0.18
COPS3-207ENST00000477299 MKRN2Q9H000 416 aaKnown RBP16.18■□□□□ 0.18
COPS3-207ENST00000477299 LHX3Q9UBR4 397 aa16.18■□□□□ 0.18
COPS3-207ENST00000477299 HPCAL4Q9UM19 191 aa16.18■□□□□ 0.18
COPS3-207ENST00000477299 SLC8A2Q9UPR5 921 aa16.18■□□□□ 0.18
COPS3-207ENST00000477299 ABCA7Q8IZY2 2146 aa16.18■□□□□ 0.18
COPS3-207ENST00000477299 MUSKO15146 869 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 INSIG1O15503 277 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 LAMTOR5O43504 91 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 TMCC1O94876 653 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 GABRG2P18507 467 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 GKP32189 559 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 SERPINB6P35237 376 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 GARSP41250 739 aaKnown RBP16.17■□□□□ 0.18
COPS3-207ENST00000477299 METAP1P53582 386 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 COPS2P61201 443 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 IL10RBQ08334 325 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 CAMK2GQ13555 558 aaPredicted RBP16.17■□□□□ 0.18
COPS3-207ENST00000477299 ANO7Q6IWH7 933 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms