RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	MRPL43	Q8N983	215 aa	Known RBP	4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ZSWIM2	Q8NEG5	633 aa		4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ZNF397	Q8NF99	534 aa	Predicted RBP	4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SPPL3	Q8TCT6	385 aa		4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ZNF483	Q8TF39	744 aa	Predicted RBP	4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PPM1E	Q8WY54	764 aa		4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CASP10	Q92851	521 aa		4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	EEF2KMT	Q96G04	330 aa		4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ZMAT2	Q96NC0	199 aa	Known RBP	4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SRPK1	Q96SB4	655 aa	Known RBP	4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	GPHA2	Q96T91	129 aa		4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PDCL3	Q9H2J4	239 aa		4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	NDST4	Q9H3R1	872 aa		4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	FAM124B	Q9H5Z6	455 aa	Predicted RBP	4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CYP3A43	Q9HB55	503 aa		4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	FANCL	Q9NW38	375 aa		4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	EHD2	Q9NZN4	543 aa		4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	FNIP2	Q9P278	1114 aa		4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	MAFF	Q9ULX9	164 aa		4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	DAAM1	Q9Y4D1	1078 aa		4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	TDRD15	B5MCY1	1934 aa	Known RBP	4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CIT	O14578	2027 aa		4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	COL4A6	Q14031	1691 aa		4.77	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CCDC163	A0A0D9SF12	145 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ANO9	A1A5B4	782 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	GTPBP10	A4D1E9	387 aa	Known RBP	4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289		M0QZQ0	153 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CEP290	O15078	2479 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	GRM6	O15303	877 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PMM2	O15305	246 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	MED7	O43513	233 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	TACC1	O75410	805 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	C1R	P00736	705 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PRL	P01236	227 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	TKT	P29401	623 aa	Known RBP	4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	GNL1	P36915	607 aa	Predicted RBP	4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	USP8	P40818	1118 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ALDH1A3	P47895	512 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	NRIP1	P48552	1158 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	TUFM	P49411	452 aa	Known RBP	4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	FXR1	P51114	621 aa	Known RBP eCLIP	4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	GUCY2F	P51841	1108 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SNX16	P57768	344 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	BPIFB4	P59827	614 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	RPL10A	P62906	217 aa	Known RBP	4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	NOP14	P78316	857 aa	Known RBP	4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SLC25A3	Q00325	362 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	UBXN1	Q04323	297 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	LRMP	Q12912	555 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	NAB2	Q15742	525 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	HSP90AA4P	Q58FG1	418 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PPM1L	Q5SGD2	360 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	TPGS2	Q68CL5	300 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	DPY19L2P1	Q6NXN4	242 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	C11orf57	Q6ZUT1	292 aa	Predicted RBP	4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	RTL10	Q7L3V2	364 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ZNF627	Q7L945	461 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CACNA2D4	Q7Z3S7	1137 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	RBM23	Q86U06	439 aa	Known RBP	4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ITIH5	Q86UX2	942 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	UNC93A	Q86WB7	457 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ZC3H3	Q8IXZ2	948 aa	Known RBP	4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	NEK11	Q8NG66	645 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	OR5B17	Q8NGF7	314 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SPPL2B	Q8TCT7	592 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	THAP3	Q8WTV1	239 aa	Predicted RBP	4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	C2orf15	Q8WU43	125 aa	Known RBP	4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	HDAC7	Q8WUI4	952 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SLC35C1	Q96A29	364 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	IQCD	Q96DY2	449 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	NAF1	Q96HR8	494 aa	Known RBP	4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	GCNA	Q96QF7	691 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SPAG5	Q96R06	1193 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CDX2	Q99626	313 aa	Predicted RBP	4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ACBD6	Q9BR61	282 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	MED10	Q9BTT4	135 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	BOC	Q9BWV1	1114 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ZBP1	Q9H171	429 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	VPS16	Q9H269	839 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SLC6A15	Q9H2J7	730 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	PLEKHA4	Q9H4M7	779 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	SAMSN1	Q9NSI8	373 aa	Known RBP	4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	GDAP2	Q9NXN4	497 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	DDX43	Q9NXZ2	648 aa	Known RBP	4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	TAB2	Q9NYJ8	693 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	GCNT4	Q9P109	453 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	HESX1	Q9UBX0	185 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CDH9	Q9ULB4	789 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	COG5	Q9UP83	839 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CEP83	Q9Y592	693 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	DNAH12	Q6ZR08	3092 aa		4.76	□□□□□ -1.65
NSMCE4A-208	ENST00000477289		A0A1W2PRX2	142 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289		I3L4J1	428 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	OAZ2	O95190	189 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	FGF19	O95750	216 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	ASS1	P00966	412 aa	Known RBP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	KRT5	P13647	590 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	CD19	P15391	556 aa		4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	HOXB8	P17481	243 aa	Predicted RBP	4.75	□□□□□ -1.65
NSMCE4A-208	ENST00000477289	DES	P17661	470 aa		4.75	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms