RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 LGSNQ5TDP6 509 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 CES4AQ5XG92 561 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 PACS1Q6VY07 963 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 ARHGAP12Q8IWW6 846 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 DIS3LQ8TF46 1054 aaKnown RBP13.64□□□□□ -0.23
HDAC7-221ENST00000477203 IGSF8Q969P0 613 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 HHIPL1Q96JK4 782 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 ZNF512Q96ME7 567 aaPredicted RBP13.64□□□□□ -0.23
HDAC7-221ENST00000477203 SLC2A6Q9UGQ3 507 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 NUMBLQ9Y6R0 609 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 FAM237BA0A1B0GVD1 139 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 FAM159BA6NKW6 160 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 SPAG6O75602 509 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 OAZ2O95190 189 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 HLA-DQB2P05538 268 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 ZBTB16Q05516 673 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 NFE2Q16621 373 aaPredicted RBP13.64□□□□□ -0.23
HDAC7-221ENST00000477203 MTDHQ86UE4 582 aaKnown RBP13.64□□□□□ -0.23
HDAC7-221ENST00000477203 NUDCD3Q8IVD9 361 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 ANKLE1Q8NAG6 615 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 SEPT8Q92599 483 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 CDKL2Q92772 493 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 CERS2Q96G23 380 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 TEKT5Q96M29 485 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 TRIM4Q9C037 500 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 HAO1Q9UJM8 370 aa13.64□□□□□ -0.23
HDAC7-221ENST00000477203 MTMR11A4FU01 709 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 AP2A1O95782 977 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 ALDOAP04075 364 aaKnown RBP13.63□□□□□ -0.23
HDAC7-221ENST00000477203 PRKCGP05129 697 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 GALTP07902 379 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 PGAM1P18669 254 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 MAGEA6P43360 314 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 GLRBP48167 497 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 TLE2Q04725 743 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 CTBP1Q13363 440 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 BLMHQ13867 455 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 ZNF460Q14592 562 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 ITIH4Q14624 930 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 MON1AQ86VX9 555 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 SLAIN1Q8ND83 568 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 PXYLP1Q8TE99 480 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 IRGQQ8WZA9 623 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 FAM136AQ96C01 138 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 PGAP3Q96FM1 320 aaPredicted RBP13.63□□□□□ -0.23
HDAC7-221ENST00000477203 HMCESQ96FZ2 354 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 FSD1LQ9BXM9 530 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 GBA3Q9H227 469 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 SMOC2Q9H3U7 446 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 PRDM5Q9NQX1 630 aaPredicted RBP13.63□□□□□ -0.23
HDAC7-221ENST00000477203 GKN1Q9NS71 199 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 KANSL3Q9P2N6 904 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 IPO11Q9UI26 975 aaKnown RBP13.63□□□□□ -0.23
HDAC7-221ENST00000477203 AHCYL1O43865 530 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 OAS1P00973 400 aaKnown RBP13.63□□□□□ -0.23
HDAC7-221ENST00000477203 FESP07332 822 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 ITGA2BP08514 1039 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 FAM163BP0C2L3 166 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 NKX3-2P78367 333 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 BFSP2Q13515 415 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 N4BP2L1Q5TBK1 243 aaPredicted RBP13.63□□□□□ -0.23
HDAC7-221ENST00000477203 CHSY1Q86X52 802 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 PSMG2Q969U7 264 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 HDAC11Q96DB2 347 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 EXOC2Q96KP1 924 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 PPP1R36Q96LQ0 422 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 CHCHD3Q9NX63 227 aaKnown RBP13.63□□□□□ -0.23
HDAC7-221ENST00000477203 MOCS1Q9NZB8 636 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 ARMCX1Q9P291 453 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 CHKBQ9Y259 395 aa13.63□□□□□ -0.23
HDAC7-221ENST00000477203 H0Y3Z8 333 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 PHGDHO43175 533 aaKnown RBP13.62□□□□□ -0.23
HDAC7-221ENST00000477203 VAPBO95292 243 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 RPLP2P05387 115 aaKnown RBP13.62□□□□□ -0.23
HDAC7-221ENST00000477203 ALDH7A1P49419 539 aaKnown RBP13.62□□□□□ -0.23
HDAC7-221ENST00000477203 APLP1P51693 650 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 NEK3P51956 506 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 FAM189BP81408 668 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 IRF9Q00978 393 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 SLC10A7Q0GE19 358 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 BST1Q10588 318 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 TRIM60Q495X7 471 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 RNF220Q5VTB9 566 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 TTC7BQ86TV6 843 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 ARID3BQ8IVW6 561 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-221ENST00000477203 KLHL29Q96CT2 875 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 SPON2Q9BUD6 331 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 FTHL17Q9BXU8 183 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 SHCBP1LQ9BZQ2 653 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 C20orf27Q9GZN8 174 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 IGSF9Q9P2J2 1179 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 SLC39A10Q9ULF5 831 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 KCNU1A8MYU2 1149 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 TLR5O60602 858 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 TSPAN3O60637 253 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 ACVRL1P37023 503 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 PDE1CQ14123 709 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-221ENST00000477203 ANKRD20A4Q4UJ75 823 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 LRRC23Q53EV4 343 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-221ENST00000477203 FYB2Q5VWT5 728 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms