RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 IL10RBQ08334 325 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 IFFO1Q0D2I5 559 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 GPS2Q13227 327 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 ZNF177Q13360 481 aaPredicted RBP14.73□□□□□ -0.05
COL4A6-206ENST00000477085 LONRF1Q17RB8 773 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 HSP90B2PQ58FF3 399 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 ITPRIPL1Q6GPH6 555 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 TMC5Q6UXY8 1006 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 PPP1R21Q6ZMI0 780 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 SH2D3CQ8N5H7 860 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 ING5Q8WYH8 240 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 BHMTQ93088 406 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 PABPC5Q96DU9 382 aaKnown RBP14.73□□□□□ -0.05
COL4A6-206ENST00000477085 TMA16Q96EY4 203 aaKnown RBP14.73□□□□□ -0.05
COL4A6-206ENST00000477085 FCRL5Q96RD9 977 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 DDX50Q9BQ39 737 aaKnown RBP14.73□□□□□ -0.05
COL4A6-206ENST00000477085 FRMD8Q9BZ67 464 aaPredicted RBP14.73□□□□□ -0.05
COL4A6-206ENST00000477085 LMAN2LQ9H0V9 348 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 MAGEH1Q9H213 219 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 SH3BP1Q9Y3L3 701 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 ILVBLA1L0T0 632 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 TTC24A2A3L6 582 aaPredicted RBP14.73□□□□□ -0.05
COL4A6-206ENST00000477085 MUSKO15146 869 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 GJB3O75712 270 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 PIAS1O75925 651 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 DDX6P26196 483 aaKnown RBP eCLIP14.73□□□□□ -0.05
COL4A6-206ENST00000477085 MAXP61244 160 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 CRADDP78560 199 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 TNK2Q07912 1038 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 NIPAL4Q0D2K0 466 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 KRT71Q3SY84 523 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 CCDC38Q502W7 563 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 C3orf62Q6ZUJ4 267 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 SETD3Q86TU7 594 aaPredicted RBP14.73□□□□□ -0.05
COL4A6-206ENST00000477085 ZNF354CQ86Y25 554 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 OR52K1Q8NGK4 314 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 TTC25Q96NG3 672 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 ACE2Q9BYF1 805 aaPredicted RBP14.73□□□□□ -0.05
COL4A6-206ENST00000477085 SP110Q9HB58 689 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 RABGEF1Q9UJ41 708 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 CDH22Q9UJ99 828 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 OR51B4Q9Y5P0 310 aa14.73□□□□□ -0.05
COL4A6-206ENST00000477085 TLDC2A0PJX2 215 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 SMIM23A6NLE4 172 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 GOLGA8KD6RF30 607 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 GLP2RO95838 553 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 C1QAP02745 245 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 MYZAPP0CAP1 466 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 MLNP12872 115 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 MZF1P28698 734 aaPredicted RBP14.72□□□□□ -0.05
COL4A6-206ENST00000477085 BMP8BP34820 402 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 AVPR1AP37288 418 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 IFNAR2P48551 515 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 RENBPP51606 427 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 ANO4Q32M45 955 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 C6orf118Q5T5N4 469 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 MARC1Q5VT66 337 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 RNF219Q5W0B1 726 aaPredicted RBP14.72□□□□□ -0.05
COL4A6-206ENST00000477085 PRPF39Q86UA1 669 aaKnown RBP14.72□□□□□ -0.05
COL4A6-206ENST00000477085 CPXM2Q8N436 756 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 CARNMT1Q8N4J0 409 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 LEMD2Q8NC56 503 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 SMG7Q92540 1137 aaKnown RBP14.72□□□□□ -0.05
COL4A6-206ENST00000477085 ALG14Q96F25 216 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 LRRC3BQ96PB8 259 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 APOL2Q9BQE5 337 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 SPON2Q9BUD6 331 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 VPS37BQ9H9H4 285 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 XAB2Q9HCS7 855 aaKnown RBP14.72□□□□□ -0.05
COL4A6-206ENST00000477085 NT5MQ9NPB1 228 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 TDP1Q9NUW8 608 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 CTNNAL1Q9UBT7 734 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 DPP7Q9UHL4 492 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 LSM7Q9UK45 103 aaKnown RBP14.72□□□□□ -0.05
COL4A6-206ENST00000477085 TTLL3Q9Y4R7 772 aa14.72□□□□□ -0.05
COL4A6-206ENST00000477085 MYO18AQ92614 2054 aaKnown RBP14.72□□□□□ -0.05
COL4A6-206ENST00000477085 LINC01565O15544 149 aa14.71□□□□□ -0.05
COL4A6-206ENST00000477085 KDELR3O43731 214 aa14.71□□□□□ -0.05
COL4A6-206ENST00000477085 TCEA3O75764 348 aa14.71□□□□□ -0.05
COL4A6-206ENST00000477085 CD160O95971 181 aa14.71□□□□□ -0.05
COL4A6-206ENST00000477085 RHOCP08134 193 aa14.71□□□□□ -0.05
COL4A6-206ENST00000477085 MMP2P08253 660 aa14.71□□□□□ -0.05
COL4A6-206ENST00000477085 MGAT1P26572 445 aa14.71□□□□□ -0.05
COL4A6-206ENST00000477085 ETFBP38117 255 aa14.71□□□□□ -0.05
COL4A6-206ENST00000477085 SESN2P58004 480 aaPredicted RBP14.71□□□□□ -0.05
COL4A6-206ENST00000477085 EFTUD2Q15029 972 aaKnown RBP eCLIP14.71□□□□□ -0.05
COL4A6-206ENST00000477085 TTC39BQ5VTQ0 682 aaPredicted RBP14.71□□□□□ -0.05
COL4A6-206ENST00000477085 IL31Q6EBC2 164 aa14.71□□□□□ -0.05
COL4A6-206ENST00000477085 TPGS1Q6ZTW0 290 aa14.71□□□□□ -0.05
COL4A6-206ENST00000477085 PALM2Q8IXS6 379 aa14.71□□□□□ -0.05
COL4A6-206ENST00000477085 TDRD5Q8NAT2 981 aaKnown RBP14.71□□□□□ -0.05
COL4A6-206ENST00000477085 HJURPQ8NCD3 748 aaPredicted RBP14.71□□□□□ -0.05
COL4A6-206ENST00000477085 ATP6V1G3Q96LB4 118 aa14.71□□□□□ -0.05
COL4A6-206ENST00000477085 EBNA1BP2Q99848 306 aaKnown RBP14.71□□□□□ -0.05
COL4A6-206ENST00000477085 LINC00597Q9H2U6 94 aa14.71□□□□□ -0.05
COL4A6-206ENST00000477085 CENPHQ9H3R5 247 aa14.71□□□□□ -0.05
COL4A6-206ENST00000477085 IGFLR1Q9H665 355 aa14.71□□□□□ -0.05
COL4A6-206ENST00000477085 CASS4Q9NQ75 786 aa14.71□□□□□ -0.05
COL4A6-206ENST00000477085 PLK2Q9NYY3 685 aa14.71□□□□□ -0.05
COL4A6-206ENST00000477085 VPS18Q9P253 973 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms