RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 IGLV3-10A0A075B6K4 115 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 ENPP3O14638 875 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 HNRNPCL1O60812 293 aaKnown RBP11.7□□□□□ -0.54
NUP188-205ENST00000477069 TADA2AO75478 443 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 HAUS5O94927 633 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 SELPP16109 830 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 CDK7P50613 346 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 PAPOLAP51003 745 aaKnown RBP11.7□□□□□ -0.54
NUP188-205ENST00000477069 STX3Q13277 289 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 LRRC49Q8IUZ0 686 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 ARID3BQ8IVW6 561 aaPredicted RBP11.7□□□□□ -0.54
NUP188-205ENST00000477069 CNTN4Q8IWV2 1026 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 UMODL1-AS1Q8N2C9 162 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 RAET1EQ8TD07 263 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 CAPNS2Q96L46 248 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 RAB3IPQ96QF0 476 aaPredicted RBP11.7□□□□□ -0.54
NUP188-205ENST00000477069 TXNDC16Q9P2K2 825 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 SCN5AQ14524 2016 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 OR6C75A6NL08 312 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 ITM2AO43736 263 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 ANXA9O76027 345 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 MOCS2O96007 188 aaPredicted RBP11.7□□□□□ -0.54
NUP188-205ENST00000477069 IGLV3-27P01718 113 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 TYK2P29597 1187 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 RPL10AP62906 217 aaKnown RBP11.7□□□□□ -0.54
NUP188-205ENST00000477069 TCTN1Q2MV58 587 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 CTXN3Q4LDR2 81 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 MS4A13Q5J8X5 152 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 SWT1Q5T5J6 900 aaKnown RBP11.7□□□□□ -0.54
NUP188-205ENST00000477069 ICE2Q659A1 982 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 TTC7BQ86TV6 843 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 PLD6Q8N2A8 252 aaKnown RBP11.7□□□□□ -0.54
NUP188-205ENST00000477069 ACVR1CQ8NER5 493 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 ATP2A3Q93084 1043 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 FAM193BQ96PV7 902 aaPredicted RBP11.7□□□□□ -0.54
NUP188-205ENST00000477069 TBC1D10AQ9BXI6 508 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.7□□□□□ -0.54
NUP188-205ENST00000477069 CRISPLD1Q9H336 500 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 C20orf96Q9NUD7 363 aaPredicted RBP11.7□□□□□ -0.54
NUP188-205ENST00000477069 COPG2Q9UBF2 871 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 ZNF212Q9UDV6 495 aa11.7□□□□□ -0.54
NUP188-205ENST00000477069 CHD5Q8TDI0 1954 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 CAPN14A8MX76 684 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 WFS1O76024 890 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 PTPN4P29074 926 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 ARRB2P32121 409 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 GATMP50440 423 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 TBX4P57082 545 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 IRX4P78413 519 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 PCID2Q5JVF3 399 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 FAM171A1Q5VUB5 890 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 PDPK2PQ6A1A2 396 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 PKN3Q6P5Z2 889 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 RSPO2Q6UXX9 243 aaPredicted RBP11.69□□□□□ -0.54
NUP188-205ENST00000477069 ALYREFQ86V81 257 aaKnown RBP11.69□□□□□ -0.54
NUP188-205ENST00000477069 CRLF3Q8IUI8 442 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 ATAD1Q8NBU5 361 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 B3GALT6Q96L58 329 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 MRGPRX2Q96LB1 330 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 PPP1R2P1Q96PQ5 205 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 SORT1Q99523 831 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 MIPEPQ99797 713 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 MRM3Q9HC36 420 aaKnown RBP11.69□□□□□ -0.54
NUP188-205ENST00000477069 CREBZFQ9NS37 354 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 IARS2Q9NSE4 1012 aaKnown RBP11.69□□□□□ -0.54
NUP188-205ENST00000477069 ZNF358Q9NW07 568 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 TMEM248Q9NWD8 314 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 CLIC5Q9NZA1 410 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 BAIAP2L1Q9UHR4 511 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 STK38LQ9Y2H1 464 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 FCHO1O14526 889 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 TIMM44O43615 452 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 SIN3BO75182 1162 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 MPOP05164 745 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 SLC2A3P11169 496 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 KCNA4P22459 653 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 ARNTP27540 789 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 RASSF2P50749 326 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 MNAT1P51948 309 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 NDST2P52849 883 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 GEMP55040 296 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 TNK2Q07912 1038 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 MPP3Q13368 585 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 CCDC153Q494R4 210 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 C10orf107Q8IVU9 208 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 FAM126BQ8IXS8 530 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 GPR22Q99680 433 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 SIKE1Q9BRV8 207 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 NMUR2Q9GZQ4 415 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 ATP13A1Q9HD20 1204 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.69□□□□□ -0.54
NUP188-205ENST00000477069 HCSTQ9UBK5 93 aa11.69□□□□□ -0.54
NUP188-205ENST00000477069 MAGED2Q9UNF1 606 aaPredicted RBP11.69□□□□□ -0.54
NUP188-205ENST00000477069 MRPL42Q9Y6G3 142 aaKnown RBP11.69□□□□□ -0.54
NUP188-205ENST00000477069 MTMR11A4FU01 709 aa11.68□□□□□ -0.54
NUP188-205ENST00000477069 GNRH1P01148 92 aa11.68□□□□□ -0.54
NUP188-205ENST00000477069 RHOQP17081 205 aa11.68□□□□□ -0.54
NUP188-205ENST00000477069 GABRB3P28472 473 aa11.68□□□□□ -0.54
NUP188-205ENST00000477069 ARCN1P48444 511 aaKnown RBP11.68□□□□□ -0.54
NUP188-205ENST00000477069 TUBB3Q13509 450 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms