RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 USP12O75317 370 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 SRGAP2BP0DMP2 458 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 ALOX15P16050 662 aaPredicted RBP16.76■□□□□ 0.27
TMEM53-208ENST00000476724 CCNCP24863 283 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 PTDSS1P48651 473 aaKnown RBP16.76■□□□□ 0.27
TMEM53-208ENST00000476724 ALDH18A1P54886 795 aaKnown RBP16.76■□□□□ 0.27
TMEM53-208ENST00000476724 ABCE1P61221 599 aaKnown RBP16.76■□□□□ 0.27
TMEM53-208ENST00000476724 ZBTB17Q13105 803 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 PPM1JQ5JR12 505 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 GLB1LQ6UWU2 654 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 TAC4Q86UU9 113 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 OR6Y1Q8NGX8 325 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 NAF1Q96HR8 494 aaKnown RBP16.76■□□□□ 0.27
TMEM53-208ENST00000476724 PPP1R2P1Q96PQ5 205 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 MID2Q9UJV3 735 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 NUP205Q92621 2012 aa16.75■□□□□ 0.27
TMEM53-208ENST00000476724 ENPP3O14638 875 aa16.75■□□□□ 0.27
TMEM53-208ENST00000476724 H2AFYO75367 372 aaKnown RBP16.75■□□□□ 0.27
TMEM53-208ENST00000476724 MPP3Q13368 585 aa16.75■□□□□ 0.27
TMEM53-208ENST00000476724 KPNB1Q14974 876 aaKnown RBP16.75■□□□□ 0.27
TMEM53-208ENST00000476724 ACSBG2Q5FVE4 666 aa16.75■□□□□ 0.27
TMEM53-208ENST00000476724 BRMS1LQ5PSV4 323 aa16.75■□□□□ 0.27
TMEM53-208ENST00000476724 C6orf163Q5TEZ5 329 aa16.75■□□□□ 0.27
TMEM53-208ENST00000476724 KCNMB4Q86W47 210 aa16.75■□□□□ 0.27
TMEM53-208ENST00000476724 LZTR1Q8N653 840 aa16.75■□□□□ 0.27
TMEM53-208ENST00000476724 ZSCAN18Q8TBC5 510 aaPredicted RBP16.75■□□□□ 0.27
TMEM53-208ENST00000476724 KCNV2Q8TDN2 545 aa16.75■□□□□ 0.27
TMEM53-208ENST00000476724 RSPH1Q8WYR4 309 aa16.75■□□□□ 0.27
TMEM53-208ENST00000476724 STMN2Q93045 179 aa16.75■□□□□ 0.27
TMEM53-208ENST00000476724 HAPLN3Q96S86 360 aa16.75■□□□□ 0.27
TMEM53-208ENST00000476724 EBF4Q9BQW3 602 aa16.75■□□□□ 0.27
TMEM53-208ENST00000476724 FTHL17Q9BXU8 183 aa16.75■□□□□ 0.27
TMEM53-208ENST00000476724 ARHGEF38Q9NXL2 777 aa16.75■□□□□ 0.27
TMEM53-208ENST00000476724 H0Y3Z8 333 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 M0QZQ0 153 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 ATP9BO43861 1147 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 LYPLA1O75608 230 aaPredicted RBP16.74■□□□□ 0.27
TMEM53-208ENST00000476724 JCHAINP01591 159 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 IGLV3-25P01717 112 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 APOA4P06727 396 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 BDNFP23560 247 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 GATMP50440 423 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 TUBB3Q13509 450 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 OLIG2Q13516 323 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 EIF4EBP2Q13542 120 aaPredicted RBP16.74■□□□□ 0.27
TMEM53-208ENST00000476724 CCDC6Q16204 474 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 HSP90AA5PQ58FG0 334 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 NOMO2Q5JPE7 1267 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 CERCAMQ5T4B2 595 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 PDPK2PQ6A1A2 396 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 CLEC14AQ86T13 490 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 LCA5Q86VQ0 697 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 THEM5Q8N1Q8 247 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 GPATCH11Q8N954 259 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 RBM15BQ8NDT2 890 aaKnown RBP16.74■□□□□ 0.27
TMEM53-208ENST00000476724 URGCPQ8TCY9 931 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 DQX1Q8TE96 717 aaKnown RBP16.74■□□□□ 0.27
TMEM53-208ENST00000476724 MFSD3Q96ES6 412 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 ZNF778Q96MU6 729 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 UROC1Q96N76 676 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 TMEM209Q96SK2 561 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 SORT1Q99523 831 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 KIFC1Q9BW19 673 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 SEZ6LQ9BYH1 1024 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 RHOBTB2Q9BYZ6 727 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 C20orf96Q9NUD7 363 aaPredicted RBP16.74■□□□□ 0.27
TMEM53-208ENST00000476724 TBC1D13Q9NVG8 400 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 IL1RAPL1Q9NZN1 696 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 DNAJB4Q9UDY4 337 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 SHROOM3Q8TF72 1996 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 A0A096LPK6 155 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 PRR5-ARHGAP8B1AHC4 643 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 TMEM114B3SHH9 223 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 PITPNM1O00562 1244 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 TM7SF2O76062 418 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 PSMG1O95456 288 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 CCL23P55773 120 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 ARHGAP8P85298 464 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 DSC1Q08554 894 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 RCN2Q14257 317 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 TSNAXIP1Q2TAA8 658 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 SLC39A5Q6ZMH5 540 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 NET1Q7Z628 596 aaPredicted RBP16.74■□□□□ 0.27
TMEM53-208ENST00000476724 SCUBE1Q8IWY4 988 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 COLGALT2Q8IYK4 626 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 PKMYT1Q99640 499 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 MCMBPQ9BTE3 642 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 PPP1R12CQ9BZL4 782 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 ABCC13Q9NSE7 274 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 PLA2G4CQ9UP65 541 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 ANKRD6Q9Y2G4 727 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 PCDHB12Q9Y5F1 795 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 CDY1Q9Y6F8 540 aa16.74■□□□□ 0.27
TMEM53-208ENST00000476724 FGF10O15520 208 aaPredicted RBP16.73■□□□□ 0.27
TMEM53-208ENST00000476724 CIB2O75838 187 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 ANXA9O76027 345 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 DNAJB1P25685 340 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 VHLP40337 213 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 CPA2P48052 419 aa16.73■□□□□ 0.27
TMEM53-208ENST00000476724 KDSRQ06136 332 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms