RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 PCDHB12Q9Y5F1 795 aa7.02□□□□□ -1.29
UBR4-212ENST00000475973 FNDC1Q4ZHG4 1894 aaPredicted RBP7.01□□□□□ -1.29
UBR4-212ENST00000475973 COL1A2P08123 1366 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 A0A0A0MRY4 1105 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 SMIM31A0A1B0GVY4 71 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 ENO4A6NNW6 628 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 H0YJX3 145 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 H3BRJ5 948 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 M0QZ92 97 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 KCNN4O15554 427 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 SIAH2O43255 324 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 TREHO43280 583 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 PRPSAP2O60256 369 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 HBP1O60381 514 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 RNASEH1O60930 286 aaKnown RBP7.01□□□□□ -1.29
UBR4-212ENST00000475973 SIN3BO75182 1162 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 FBXO21O94952 628 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 PENKP01210 267 aaPredicted RBP7.01□□□□□ -1.29
UBR4-212ENST00000475973 NFICP08651 508 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 STAG3L1P0CL83 205 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 SMIM18P0DKX4 95 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 UQCRBP14927 111 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 VAV1P15498 845 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 ITGAXP20702 1163 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 WEE1P30291 646 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 HOXC8P31273 242 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 GRIA2P42262 883 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 RAP1GAPP47736 663 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 NDST1P52848 882 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 BCAR1P56945 870 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 YWHAGP61981 247 aaKnown RBP eCLIP7.01□□□□□ -1.29
UBR4-212ENST00000475973 DEFB103AP81534 67 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 MXRA7P84157 204 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 TMPRSS15P98073 1019 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 TFAMQ00059 246 aaKnown RBP7.01□□□□□ -1.29
UBR4-212ENST00000475973 DSG1Q02413 1049 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 ZBTB16Q05516 673 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 DEUP1Q05D60 604 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 SEMA3BQ13214 749 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 RFTN1Q14699 578 aaPredicted RBP7.01□□□□□ -1.29
UBR4-212ENST00000475973 HERC3Q15034 1050 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 PAFAH1B3Q15102 231 aaKnown RBP7.01□□□□□ -1.29
UBR4-212ENST00000475973 CCDC6Q16204 474 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 C15orf59Q2T9L4 293 aaPredicted RBP7.01□□□□□ -1.29
UBR4-212ENST00000475973 FASTKD1Q53R41 847 aaKnown RBP7.01□□□□□ -1.29
UBR4-212ENST00000475973 XKR4Q5GH76 650 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 EFHC1Q5JVL4 640 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 FAM102AQ5T9C2 384 aaPredicted RBP7.01□□□□□ -1.29
UBR4-212ENST00000475973 RNF220Q5VTB9 566 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 OTUD1Q5VV17 481 aaPredicted RBP7.01□□□□□ -1.29
UBR4-212ENST00000475973 ARMC3Q5W041 872 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 KCTD11Q693B1 232 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 NCBP2-AS2Q69YL0 99 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 TRIM68Q6AZZ1 485 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 JADE1Q6IE81 842 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 PMF1Q6P1K2 205 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 BORAQ6PGQ7 559 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 ALKAL1Q6UXT8 129 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 SDCCAG8Q86SQ7 713 aaPredicted RBP7.01□□□□□ -1.29
UBR4-212ENST00000475973 DHDDSQ86SQ9 333 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 TMEM135Q86UB9 458 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 WDR75Q8IWA0 830 aaKnown RBP7.01□□□□□ -1.29
UBR4-212ENST00000475973 NDUFAF2Q8N183 169 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 MPP5Q8N3R9 675 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 ZSCAN18Q8TBC5 510 aaPredicted RBP7.01□□□□□ -1.29
UBR4-212ENST00000475973 TFB1MQ8WVM0 346 aaKnown RBP7.01□□□□□ -1.29
UBR4-212ENST00000475973 STMN2Q93045 179 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 WNT8BQ93098 351 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 MCUR1Q96AQ8 359 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 SPATA13Q96N96 652 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 ACAP3Q96P50 834 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 CSPG4P5Q96PW8 444 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 ASB2Q96Q27 587 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 TUBGCP5Q96RT8 1024 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 RTKNQ9BST9 563 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 SLC2A11Q9BYW1 496 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 RBM38Q9H0Z9 239 aaKnown RBP7.01□□□□□ -1.29
UBR4-212ENST00000475973 RNPEPQ9H4A4 650 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 SMARCAD1Q9H4L7 1026 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 RPF1Q9H9Y2 349 aaKnown RBP7.01□□□□□ -1.29
UBR4-212ENST00000475973 CERS4Q9HA82 394 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 PLEKHA5Q9HAU0 1116 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 DTLQ9NZJ0 730 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 COPG2Q9UBF2 871 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 PPARGC1AQ9UBK2 798 aaKnown RBP7.01□□□□□ -1.29
UBR4-212ENST00000475973 ADAMTS6Q9UKP5 1117 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 TSPAN16Q9UKR8 245 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 CNOT11Q9UKZ1 510 aaKnown RBP7.01□□□□□ -1.29
UBR4-212ENST00000475973 PADI4Q9UM07 663 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 PRPF19Q9UMS4 504 aaKnown RBP7.01□□□□□ -1.29
UBR4-212ENST00000475973 POMPQ9Y244 141 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 INSL6Q9Y581 213 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 RAD54BQ9Y620 910 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 IKBKGQ9Y6K9 419 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 COMMD3-BMI1R4GMX3 469 aa7.01□□□□□ -1.29
UBR4-212ENST00000475973 MCM3APO60318 1980 aa7□□□□□ -1.29
UBR4-212ENST00000475973 SCN10AQ9Y5Y9 1956 aa7□□□□□ -1.29
UBR4-212ENST00000475973 TMEM114B3SHH9 223 aa7□□□□□ -1.29
UBR4-212ENST00000475973 G3V2L1 256 aa7□□□□□ -1.29
UBR4-212ENST00000475973 H7C0C1 242 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms