RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 TMPRSS9Q7Z410 1059 aa10.29□□□□□ -0.76
CCHCR1-212ENST00000475684 FAM184AQ8NB25 1140 aa10.29□□□□□ -0.76
CCHCR1-212ENST00000475684 HJURPQ8NCD3 748 aaPredicted RBP10.29□□□□□ -0.76
CCHCR1-212ENST00000475684 RNF139Q8WU17 664 aa10.29□□□□□ -0.76
CCHCR1-212ENST00000475684 POM121Q96HA1 1249 aa10.29□□□□□ -0.76
CCHCR1-212ENST00000475684 DUSP16Q9BY84 665 aa10.29□□□□□ -0.76
CCHCR1-212ENST00000475684 IRX2Q9BZI1 471 aaPredicted RBP10.29□□□□□ -0.76
CCHCR1-212ENST00000475684 B3GNT4Q9C0J1 378 aa10.29□□□□□ -0.76
CCHCR1-212ENST00000475684 LRRN3Q9H3W5 708 aa10.29□□□□□ -0.76
CCHCR1-212ENST00000475684 OLFML3Q9NRN5 406 aa10.29□□□□□ -0.76
CCHCR1-212ENST00000475684 GPR27Q9NS67 375 aa10.29□□□□□ -0.76
CCHCR1-212ENST00000475684 OLA1Q9NTK5 396 aaKnown RBP10.29□□□□□ -0.76
CCHCR1-212ENST00000475684 PPM1HQ9ULR3 514 aa10.29□□□□□ -0.76
CCHCR1-212ENST00000475684 NYNRINQ9P2P1 1898 aaKnown RBP10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 LMO7DNF2Z398 122 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 K7EM74 188 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 PRF1P14222 555 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 IDEP14735 1019 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 RABIFP47224 123 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 SLC11A2P49281 568 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 NUMBP49757 651 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 IRX6P78412 446 aaPredicted RBP10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 ZFP36L1Q07352 338 aaKnown RBP10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 DSG2Q14126 1118 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 ACCSLQ4AC99 568 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 RILPL1Q5EBL4 403 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 PIP5KL1Q5T9C9 394 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 SEL1L3Q68CR1 1132 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 KYAT3Q6YP21 454 aaKnown RBP10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 APCDD1Q8J025 514 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 RBFAQ8N0V3 343 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 SLC34A3Q8N130 599 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 PRR7Q8TB68 274 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 DNAJC19Q96DA6 116 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 CDH19Q9H159 772 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 SIRPGQ9P1W8 387 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 APOBEC3BQ9UH17 382 aaKnown RBP10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 GGT7Q9UJ14 662 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 ZFR2Q9UPR6 939 aaKnown RBP10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 DAAM1Q9Y4D1 1078 aa10.28□□□□□ -0.76
CCHCR1-212ENST00000475684 SCN8AQ9UQD0 1980 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 CAPN5O15484 640 aaPredicted RBP10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 MSI1O43347 362 aaKnown RBP10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 DUX1O43812 170 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 ITGB7P26010 798 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 RPS24P62847 133 aaKnown RBP10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 CCDC15Q0P6D6 951 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 CDC20Q12834 499 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 EIF2B5Q13144 721 aaKnown RBP10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 NCOA4Q13772 614 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 FAM133BQ5BKY9 247 aaKnown RBP10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 PHF19Q5T6S3 580 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 ASB18Q6ZVZ8 466 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 TIPARPQ7Z3E1 657 aaKnown RBP10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 CACNA2D3Q8IZS8 1091 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 CFAP52Q8N1V2 620 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 ARL10Q8N8L6 244 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 Q8N9G6 341 aaPredicted RBP10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 FRS2Q8WU20 508 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 PDCD6IPQ8WUM4 868 aaKnown RBP10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 NDRG1Q92597 394 aaKnown RBP10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 EDEM1Q92611 657 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 MARVELD3Q96A59 401 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 SLC45A3Q96JT2 553 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 PRICKLE1Q96MT3 831 aaPredicted RBP10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 TWNKQ96RR1 684 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 SLC17A9Q9BYT1 436 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 TCEAL2Q9H3H9 227 aaPredicted RBP10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 AKAP7Q9P0M2 348 aaPredicted RBP10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 DOLKQ9UPQ8 538 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 CSMD2Q7Z408 3487 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 AKAP9Q99996 3911 aa10.27□□□□□ -0.77
CCHCR1-212ENST00000475684 APCP25054 2843 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 MKRN2OSH3BPM6 223 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 MCF2LO15068 1137 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 RAD51BO15315 384 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 SPINT1O43278 529 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 BNIP3LO60238 219 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 ACSL4O60488 711 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 LUC7L3O95232 432 aaKnown RBP10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 ZBED1O96006 694 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 PAK4O96013 591 aaPredicted RBP10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 LDLRP01130 860 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 CCL4P13236 92 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 UGT1A3P35503 534 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 RECQLP46063 649 aaPredicted RBP10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 CYP2J2P51589 502 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 TKTL1P51854 596 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 SGSM1Q2NKQ1 1148 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 TPRG1LQ5T0D9 272 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 PPP1R26Q5T8A7 1209 aaPredicted RBP10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 UNC45BQ8IWX7 931 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 KYQ8NBH2 561 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 SCG3Q8WXD2 468 aaKnown RBP10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 MYEOVQ96EZ4 313 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 DDX50Q9BQ39 737 aaKnown RBP10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 LLPHQ9BRT6 129 aaKnown RBP10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 LRRC61Q9BV99 259 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 NT5C1AQ9BXI3 368 aa10.26□□□□□ -0.77
CCHCR1-212ENST00000475684 SLC4A5Q9BY07 1137 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms