RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 HS3ST4Q9Y661 456 aa18.28■□□□□ 0.52
PCGF3-209ENST00000475288 A0A1W2PQU0 124 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 BECN2A8MW95 431 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 PAGE1O75459 146 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 DAB1O75553 588 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 FGFR1OPO95684 399 aaKnown RBP18.27■□□□□ 0.52
PCGF3-209ENST00000475288 PRB1P04280 392 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 CTSLP07711 333 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 GIMD1P0DJR0 217 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 ALPPL2P10696 532 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 HNRNPA2B1P22626 353 aaKnown RBP18.27■□□□□ 0.52
PCGF3-209ENST00000475288 AKT2P31751 481 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 CHRNA3P32297 505 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 NOS2P35228 1153 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 IRAK1P51617 712 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 SNX16P57768 344 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 DAB2P98082 770 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 PAK1Q13153 545 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 ISM2Q6H9L7 571 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 C11orf57Q6ZUT1 292 aaPredicted RBP18.27■□□□□ 0.52
PCGF3-209ENST00000475288 SLC26A9Q7LBE3 791 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 ABI3BPQ7Z7G0 1075 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 SETD3Q86TU7 594 aaPredicted RBP18.27■□□□□ 0.52
PCGF3-209ENST00000475288 SPACA3Q8IXA5 215 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 LSMEM2Q8N112 164 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 FAM181AQ8N9Y4 354 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 ZNF248Q8NDW4 579 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 ZNF397Q8NF99 534 aaPredicted RBP18.27■□□□□ 0.52
PCGF3-209ENST00000475288 OR2A12Q8NGT7 310 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 SHC3Q92529 594 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 HIC2Q96JB3 615 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 PSMB7Q99436 277 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 HDAC8Q9BY41 377 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 ACP6Q9NPH0 428 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 GPR27Q9NS67 375 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 NLGN3Q9NZ94 848 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 CTNND2Q9UQB3 1225 aa18.27■□□□□ 0.52
PCGF3-209ENST00000475288 CAPN8A6NHC0 703 aa18.26■□□□□ 0.51
PCGF3-209ENST00000475288 PIAS2O75928 621 aa18.26■□□□□ 0.51
PCGF3-209ENST00000475288 ZIC2O95409 532 aaPredicted RBP18.26■□□□□ 0.51
PCGF3-209ENST00000475288 PRNPP04156 253 aa18.26■□□□□ 0.51
PCGF3-209ENST00000475288 NUMBP49757 651 aa18.26■□□□□ 0.51
PCGF3-209ENST00000475288 POM121L1PQ3SYA9 428 aa18.26■□□□□ 0.51
PCGF3-209ENST00000475288 BRMS1LQ5PSV4 323 aa18.26■□□□□ 0.51
PCGF3-209ENST00000475288 ZSCAN30Q86W11 494 aa18.26■□□□□ 0.51
PCGF3-209ENST00000475288 ZDHHC17Q8IUH5 632 aa18.26■□□□□ 0.51
PCGF3-209ENST00000475288 DCAF4L2Q8NA75 395 aa18.26■□□□□ 0.51
PCGF3-209ENST00000475288 DUSP23Q9BVJ7 150 aa18.26■□□□□ 0.51
PCGF3-209ENST00000475288 MUC3BQ9H195 1237 aa18.26■□□□□ 0.51
PCGF3-209ENST00000475288 EVA1BQ9NVM1 165 aa18.26■□□□□ 0.51
PCGF3-209ENST00000475288 UCKL1Q9NWZ5 548 aa18.26■□□□□ 0.51
PCGF3-209ENST00000475288 ARHGEF38Q9NXL2 777 aa18.26■□□□□ 0.51
PCGF3-209ENST00000475288 APEX2Q9UBZ4 518 aa18.26■□□□□ 0.51
PCGF3-209ENST00000475288 CA5BQ9Y2D0 317 aa18.26■□□□□ 0.51
PCGF3-209ENST00000475288 SYNJ2BP-COX16A0A087WUM0 186 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 NEMP2A6NFY4 417 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 SLC31A1O15431 190 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 OPA1O60313 960 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 MT-CO1P00395 513 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 RHOCP08134 193 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 PRLRP16471 622 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 CXCR3P49682 368 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 UCNP55089 124 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 PCBP4P57723 403 aaKnown RBP18.25■□□□□ 0.51
PCGF3-209ENST00000475288 ERVPABLB-1P60509 514 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 SLC6A3Q01959 620 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 NME3Q13232 169 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 TMEM259Q4ZIN3 620 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 GCNT7Q6ZNI0 430 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 FAM183BPQ6ZVS7 135 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 ERN2Q76MJ5 926 aaKnown RBP18.25■□□□□ 0.51
PCGF3-209ENST00000475288 C14orf80Q86SX3 495 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 ZNF683Q8IZ20 524 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 ATP11CQ8NB49 1132 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 C1orf131Q8NDD1 294 aaKnown RBP18.25■□□□□ 0.51
PCGF3-209ENST00000475288 OR13H1Q8NG92 308 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 ARRDC3Q96B67 414 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 PGAP3Q96FM1 320 aaPredicted RBP18.25■□□□□ 0.51
PCGF3-209ENST00000475288 WBP1Q96G27 269 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 DEPDC7Q96QD5 511 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 NPY6RQ99463 290 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 SRRTQ9BXP5 876 aaKnown RBP18.25■□□□□ 0.51
PCGF3-209ENST00000475288 DYRK4Q9NR20 520 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 COX16Q9P0S2 106 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 VPS51Q9UID3 782 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 PAXBP1Q9Y5B6 917 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 HS3ST3A1Q9Y663 406 aa18.25■□□□□ 0.51
PCGF3-209ENST00000475288 GTPBP10A4D1E9 387 aaKnown RBP18.24■□□□□ 0.51
PCGF3-209ENST00000475288 DRGXA6NNA5 263 aa18.24■□□□□ 0.51
PCGF3-209ENST00000475288 A6NNZ2 444 aa18.24■□□□□ 0.51
PCGF3-209ENST00000475288 M0QYT0 321 aa18.24■□□□□ 0.51
PCGF3-209ENST00000475288 ERVH48-1M5A8F1 160 aa18.24■□□□□ 0.51
PCGF3-209ENST00000475288 KPNA3O00505 521 aaPredicted RBP18.24■□□□□ 0.51
PCGF3-209ENST00000475288 SCAMP1O15126 338 aa18.24■□□□□ 0.51
PCGF3-209ENST00000475288 GRAP2O75791 330 aa18.24■□□□□ 0.51
PCGF3-209ENST00000475288 DUSP3P51452 185 aaPredicted RBP18.24■□□□□ 0.51
PCGF3-209ENST00000475288 HNRNPKP61978 463 aaKnown RBP eCLIP18.24■□□□□ 0.519e-7■■□□□ 12.7
PCGF3-209ENST00000475288 OTUD1Q5VV17 481 aaPredicted RBP18.24■□□□□ 0.51
PCGF3-209ENST00000475288 IGF2-ASQ6U949 168 aa18.24■□□□□ 0.51
PCGF3-209ENST00000475288 ZNF783Q6ZMS7 281 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms