RNA–Protein interactions for RNA: ENST00000474873.5

HPS1-210, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 698 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-210ENST00000474873 ATP11CQ8NB49 1132 aa8.2□□□□□ -1.1
HPS1-210ENST00000474873 ACRBPQ8NEB7 543 aa8.2□□□□□ -1.1
HPS1-210ENST00000474873 CASKIN2Q8WXE0 1202 aa8.2□□□□□ -1.1
HPS1-210ENST00000474873 ANP32BQ92688 251 aaKnown RBP8.2□□□□□ -1.1
HPS1-210ENST00000474873 PRCCQ92733 491 aaPredicted RBP8.2□□□□□ -1.1
HPS1-210ENST00000474873 PTPRN2Q92932 1015 aa8.2□□□□□ -1.1
HPS1-210ENST00000474873 NKD2Q969F2 451 aaPredicted RBP8.2□□□□□ -1.1
HPS1-210ENST00000474873 SIPA1Q96FS4 1042 aa8.2□□□□□ -1.1
HPS1-210ENST00000474873 ZC3H10Q96K80 434 aaKnown RBP8.2□□□□□ -1.1
HPS1-210ENST00000474873 TPSD1Q9BZJ3 242 aa8.2□□□□□ -1.1
HPS1-210ENST00000474873 CEP44Q9C0F1 390 aa8.2□□□□□ -1.1
HPS1-210ENST00000474873 LACRTQ9GZZ8 138 aa8.2□□□□□ -1.1
HPS1-210ENST00000474873 KLC2Q9H0B6 622 aa8.2□□□□□ -1.1
HPS1-210ENST00000474873 RSPH9Q9H1X1 276 aaPredicted RBP8.2□□□□□ -1.1
HPS1-210ENST00000474873 EPC1Q9H2F5 836 aa8.2□□□□□ -1.1
HPS1-210ENST00000474873 LRRC19Q9H756 370 aa8.2□□□□□ -1.1
HPS1-210ENST00000474873 ITM2CQ9NQX7 267 aa8.2□□□□□ -1.1
HPS1-210ENST00000474873 SCML1Q9UN30 329 aa8.2□□□□□ -1.1
HPS1-210ENST00000474873 TFR2Q9UP52 801 aa8.2□□□□□ -1.1
HPS1-210ENST00000474873 DUSP10Q9Y6W6 482 aa8.2□□□□□ -1.1
HPS1-210ENST00000474873 CKAP5Q14008 2032 aa8.2□□□□□ -1.1
HPS1-210ENST00000474873 FAM186AA6NE01 2351 aa8.2□□□□□ -1.1
HPS1-210ENST00000474873 TPRP12270 2363 aaKnown RBP8.2□□□□□ -1.1
HPS1-210ENST00000474873 CHD6Q8TD26 2715 aa8.2□□□□□ -1.1
HPS1-210ENST00000474873 CHD5Q8TDI0 1954 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 ARHGAP42A6NI28 874 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 ZNF487B1APH4 448 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 K7ERQ8 282 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 MCF2LO15068 1137 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 DCLK1O15075 740 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 ALOX15BO15296 676 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 SMAD6O43541 496 aaKnown RBP8.19□□□□□ -1.1
HPS1-210ENST00000474873 SPOPO43791 374 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 CD160O95971 181 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 IGLV3-19P01714 112 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 LMNAP02545 664 aaKnown RBP8.19□□□□□ -1.1
HPS1-210ENST00000474873 ACADMP11310 421 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 AMPD1P23109 780 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 KDELR1P24390 212 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 OXTRP30559 389 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 GJC1P36383 396 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 SERPINH1P50454 418 aaKnown RBP8.19□□□□□ -1.1
HPS1-210ENST00000474873 PAPOLAP51003 745 aaKnown RBP8.19□□□□□ -1.1
HPS1-210ENST00000474873 TPMTP51580 245 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 NAP1L1P55209 391 aaKnown RBP8.19□□□□□ -1.1
HPS1-210ENST00000474873 RPS14P62263 151 aaKnown RBP8.19□□□□□ -1.1
HPS1-210ENST00000474873 ARF5P84085 180 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 SFSWAPQ12872 951 aaKnown RBP8.19□□□□□ -1.1
HPS1-210ENST00000474873 SRSF5Q13243 272 aaKnown RBP8.19□□□□□ -1.1
HPS1-210ENST00000474873 SIM2Q14190 667 aaPredicted RBP8.19□□□□□ -1.1
HPS1-210ENST00000474873 DPYSL3Q14195 570 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 IFI16Q16666 785 aaKnown RBP8.19□□□□□ -1.1
HPS1-210ENST00000474873 INO80DQ53TQ3 878 aaPredicted RBP8.19□□□□□ -1.1
HPS1-210ENST00000474873 ANKRD20A8PQ5CZ79 823 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 SPDYCQ5MJ68 293 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 ZFYVE27Q5T4F4 411 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 ZNF776Q68DI1 518 aaPredicted RBP8.19□□□□□ -1.1
HPS1-210ENST00000474873 TMCO3Q6UWJ1 677 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 KIAA1324Q6UXG2 1013 aaKnown RBP8.19□□□□□ -1.1
HPS1-210ENST00000474873 LINGO4Q6UY18 593 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 CEP68Q76N32 757 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 DSG4Q86SJ6 1040 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 DAAM2Q86T65 1068 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 ZNF354CQ86Y25 554 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 PLPP6Q8IY26 295 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 NPWQ8N729 165 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 SUMF1Q8NBK3 374 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 TPCN2Q8NHX9 752 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 KIAA1524Q8TCG1 905 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 RLN3Q8WXF3 142 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 OR8D1Q8WZ84 308 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 RAPGEF5Q92565 580 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 ISG20Q96AZ6 181 aaKnown RBP8.19□□□□□ -1.1
HPS1-210ENST00000474873 FAF2Q96CS3 445 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 ERLEC1Q96DZ1 483 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 HMCESQ96FZ2 354 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 SPACA7Q96KW9 195 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 CCDC114Q96M63 670 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 FAM129BQ96TA1 746 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 ZNF670Q9BS34 389 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 DESI2Q9BSY9 194 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 CALN1Q9BXU9 219 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 SLC39A8Q9C0K1 460 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 SLC6A17Q9H1V8 727 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 MTG2Q9H4K7 406 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 DDX56Q9NY93 547 aaKnown RBP8.19□□□□□ -1.1
HPS1-210ENST00000474873 USP36Q9P275 1121 aaKnown RBP8.19□□□□□ -1.1
HPS1-210ENST00000474873 SALL4Q9UJQ4 1053 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 RAB23Q9ULC3 237 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 FARP1Q9Y4F1 1045 aaPredicted RBP8.19□□□□□ -1.1
HPS1-210ENST00000474873 ADGRG1Q9Y653 693 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 MUC22E2RYF6 1773 aaPredicted RBP8.19□□□□□ -1.1
HPS1-210ENST00000474873 DMDP11532 3685 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 NUP205Q92621 2012 aa8.19□□□□□ -1.1
HPS1-210ENST00000474873 LAMA1P25391 3075 aa8.18□□□□□ -1.1
HPS1-210ENST00000474873 GON4LQ3T8J9 2241 aa8.18□□□□□ -1.1
HPS1-210ENST00000474873 LRRD1A4D1F6 860 aa8.18□□□□□ -1.1
HPS1-210ENST00000474873 C3orf70A6NLC5 250 aaPredicted RBP8.18□□□□□ -1.1
HPS1-210ENST00000474873 MAP3K13O43283 966 aa8.18□□□□□ -1.1
HPS1-210ENST00000474873 PSTPIP1O43586 416 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms