RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 PLXND1Q9Y4D7 1925 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 TMEM110-MUSTN1A8MSY1 372 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 C10orf142B7Z368 130 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 ALOX15BO15296 676 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 DAPK3O43293 454 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 SMAD6O43541 496 aaKnown RBP17.29■□□□□ 0.36
SCAF11-206ENST00000474828 HRO43593 1189 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 PRAMEF11O60813 436 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 SIN3BO75182 1162 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 CTNNA1P35221 906 aaKnown RBP17.29■□□□□ 0.36
SCAF11-206ENST00000474828 P2RY2P41231 377 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 MMRN1Q13201 1228 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 ELAVL3Q14576 367 aaKnown RBP17.29■□□□□ 0.36
SCAF11-206ENST00000474828 DLG2Q15700 870 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 IFI16Q16666 785 aaKnown RBP17.29■□□□□ 0.36
SCAF11-206ENST00000474828 IL31Q6EBC2 164 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 ANO7Q6IWH7 933 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 TMCO3Q6UWJ1 677 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 LRRC49Q8IUZ0 686 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 KCTD6Q8NC69 237 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 GAB3Q8WWW8 586 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 FATE1Q969F0 183 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 RNF157Q96PX1 679 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 SPON2Q9BUD6 331 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 TSGA10Q9BZW7 698 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 GOLPH3Q9H4A6 298 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 ITM2CQ9NQX7 267 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 TRIM10Q9UDY6 481 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 PCDHA3Q9Y5H8 950 aa17.29■□□□□ 0.36
SCAF11-206ENST00000474828 K7ERQ8 282 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 CBX4O00257 560 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 MCF2LO15068 1137 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 BUB1O43683 1085 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 SPOPO43791 374 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 CTNNA2P26232 953 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 SERPINB6P35237 376 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 SSR1P43307 286 aaKnown RBP17.28■□□□□ 0.36
SCAF11-206ENST00000474828 PXNP49023 591 aaPredicted RBP17.28■□□□□ 0.36
SCAF11-206ENST00000474828 PEX5P50542 639 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 RPS14P62263 151 aaKnown RBP17.28■□□□□ 0.36
SCAF11-206ENST00000474828 KRT81Q14533 505 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 NCBP2-AS2Q69YL0 99 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 SLC9A4Q6AI14 798 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 DAAM2Q86T65 1068 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 NT5DC3Q86UY8 548 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 TMPRSS6Q8IU80 811 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 PCDH20Q8N6Y1 951 aaKnown RBP17.28■□□□□ 0.36
SCAF11-206ENST00000474828 ZNF366Q8N895 744 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 OR2A12Q8NGT7 310 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 KIAA1524Q8TCG1 905 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 ZC3H10Q96K80 434 aaKnown RBP17.28■□□□□ 0.36
SCAF11-206ENST00000474828 MTG2Q9H4K7 406 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 FAM86C1Q9NVL1 165 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 HPCAL4Q9UM19 191 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 SCML1Q9UN30 329 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 MFHAS1Q9Y4C4 1052 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 HYOU1Q9Y4L1 999 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 EML5Q05BV3 1969 aa17.28■□□□□ 0.36
SCAF11-206ENST00000474828 ARHGAP42A6NI28 874 aa17.27■□□□□ 0.36
SCAF11-206ENST00000474828 ZNF217O75362 1048 aa17.27■□□□□ 0.36
SCAF11-206ENST00000474828 PEX11BO96011 259 aa17.27■□□□□ 0.36
SCAF11-206ENST00000474828 CCDC175P0C221 793 aa17.27■□□□□ 0.36
SCAF11-206ENST00000474828 VAV1P15498 845 aa17.27■□□□□ 0.36
SCAF11-206ENST00000474828 CDKN2BP42772 138 aa17.27■□□□□ 0.36
SCAF11-206ENST00000474828 PAPOLAP51003 745 aaKnown RBP17.27■□□□□ 0.36
SCAF11-206ENST00000474828 C22orf39Q6P5X5 142 aa17.27■□□□□ 0.36
SCAF11-206ENST00000474828 LINGO4Q6UY18 593 aa17.27■□□□□ 0.36
SCAF11-206ENST00000474828 C11orf74Q86VG3 221 aa17.27■□□□□ 0.36
SCAF11-206ENST00000474828 ATP11CQ8NB49 1132 aa17.27■□□□□ 0.36
SCAF11-206ENST00000474828 SUMF1Q8NBK3 374 aa17.27■□□□□ 0.36
SCAF11-206ENST00000474828 EXD1Q8NHP7 514 aa17.27■□□□□ 0.36
SCAF11-206ENST00000474828 HMGB4Q8WW32 186 aa17.27■□□□□ 0.36
SCAF11-206ENST00000474828 ATOH1Q92858 354 aaPredicted RBP17.27■□□□□ 0.36
SCAF11-206ENST00000474828 ZNF599Q96NL3 588 aa17.27■□□□□ 0.36
SCAF11-206ENST00000474828 CALN1Q9BXU9 219 aa17.27■□□□□ 0.36
SCAF11-206ENST00000474828 KCNF1Q9H3M0 494 aa17.27■□□□□ 0.36
SCAF11-206ENST00000474828 PPM1HQ9ULR3 514 aa17.27■□□□□ 0.36
SCAF11-206ENST00000474828 USP34Q70CQ2 3546 aa17.27■□□□□ 0.35
SCAF11-206ENST00000474828 FRYLO94915 3013 aa17.26■□□□□ 0.35
SCAF11-206ENST00000474828 CCDC66A2RUB6 948 aa17.26■□□□□ 0.35
SCAF11-206ENST00000474828 KRT86O43790 486 aa17.26■□□□□ 0.35
SCAF11-206ENST00000474828 NRDCO43847 1150 aa17.26■□□□□ 0.35
SCAF11-206ENST00000474828 MAFKO60675 156 aa17.26■□□□□ 0.35
SCAF11-206ENST00000474828 PTPN7P35236 360 aa17.26■□□□□ 0.35
SCAF11-206ENST00000474828 IL10RBQ08334 325 aa17.26■□□□□ 0.35
SCAF11-206ENST00000474828 GALNT2Q10471 571 aa17.26■□□□□ 0.35
SCAF11-206ENST00000474828 BYSLQ13895 437 aaKnown RBP17.26■□□□□ 0.35
SCAF11-206ENST00000474828 USP39Q53GS9 565 aaKnown RBP17.26■□□□□ 0.35
SCAF11-206ENST00000474828 SPDYCQ5MJ68 293 aa17.26■□□□□ 0.35
SCAF11-206ENST00000474828 HEATR6Q6AI08 1181 aaKnown RBP17.26■□□□□ 0.35
SCAF11-206ENST00000474828 TP53INP2Q8IXH6 220 aa17.26■□□□□ 0.35
SCAF11-206ENST00000474828 RCOR2Q8IZ40 523 aa17.26■□□□□ 0.35
SCAF11-206ENST00000474828 SYCE1Q8N0S2 351 aa17.26■□□□□ 0.35
SCAF11-206ENST00000474828 PLD5Q8N7P1 536 aa17.26■□□□□ 0.35
SCAF11-206ENST00000474828 ANP32BQ92688 251 aaKnown RBP17.26■□□□□ 0.35
SCAF11-206ENST00000474828 KRT35Q92764 455 aa17.26■□□□□ 0.35
SCAF11-206ENST00000474828 SIPA1Q96FS4 1042 aa17.26■□□□□ 0.35
SCAF11-206ENST00000474828 CELF6Q96J87 481 aaKnown RBP17.26■□□□□ 0.35
SCAF11-206ENST00000474828 TSGA13Q96PP4 275 aa17.26■□□□□ 0.35
SCAF11-206ENST00000474828 KLHL11Q9NVR0 708 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms