RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 CES3Q6UWW8 571 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 RANBP10Q6VN20 620 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 RNF19BQ6ZMZ0 732 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 OTOP3Q7RTS5 596 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 KCNMB4Q86W47 210 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 TMEM173Q86WV6 379 aaPredicted RBP9.99□□□□□ -0.81
USP39-214ENST00000474572 CEP57Q86XR8 500 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 DNAAF3Q8N9W5 541 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 OR6Y1Q8NGX8 325 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 RFWD2Q8NHY2 731 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 OVCA2Q8WZ82 227 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 E2F7Q96AV8 911 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 SKA1Q96BD8 255 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 MFSD3Q96ES6 412 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 PGLYRP2Q96PD5 576 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 TRIM55Q9BYV6 548 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 UBE2OQ9C0C9 1292 aaKnown RBP9.99□□□□□ -0.81
USP39-214ENST00000474572 UNC93B1Q9H1C4 597 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 ARNT2Q9HBZ2 717 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 HSFX1Q9UBD0 423 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 HCSTQ9UBK5 93 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 IPO11Q9UI26 975 aaKnown RBP9.99□□□□□ -0.81
USP39-214ENST00000474572 GGT7Q9UJ14 662 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 LRFN2Q9ULH4 789 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 HBS1LQ9Y450 684 aaKnown RBP9.99□□□□□ -0.81
USP39-214ENST00000474572 BACE2Q9Y5Z0 518 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 PLXNA4Q9HCM2 1894 aa9.99□□□□□ -0.81
USP39-214ENST00000474572 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.98□□□□□ -0.81
USP39-214ENST00000474572 SLC38A8A6NNN8 435 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 TRAFD1O14545 582 aaPredicted RBP9.98□□□□□ -0.81
USP39-214ENST00000474572 TIMM44O43615 452 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 ATP9BO43861 1147 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 MGRN1O60291 552 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 MOCS2O96007 188 aaPredicted RBP9.98□□□□□ -0.81
USP39-214ENST00000474572 PROCP04070 461 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 MPOP05164 745 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 ATP5BP06576 529 aaKnown RBP9.98□□□□□ -0.81
USP39-214ENST00000474572 NQO1P15559 274 aaKnown RBP9.98□□□□□ -0.81
USP39-214ENST00000474572 ATF6P18850 670 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 DNAJB1P25685 340 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 NMBRP28336 390 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 HNRNPH1P31943 449 aaKnown RBP9.98□□□□□ -0.81
USP39-214ENST00000474572 HADHAP40939 763 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 SERPINB8P50452 374 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 KPNA1P52294 538 aaPredicted RBP9.98□□□□□ -0.81
USP39-214ENST00000474572 YBEYP58557 167 aaPredicted RBP9.98□□□□□ -0.81
USP39-214ENST00000474572 ELF3P78545 371 aaPredicted RBP9.98□□□□□ -0.81
USP39-214ENST00000474572 EFEMP1Q12805 493 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 TAF10Q12962 218 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 PCLAFQ15004 111 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 SETDB1Q15047 1291 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 PSMD5Q16401 504 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 CTC1Q2NKJ3 1217 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 ALFQ53S48 1182 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 PDPK2PQ6A1A2 396 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 PKN3Q6P5Z2 889 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 CYB5D1Q6P9G0 228 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 CLEC14AQ86T13 490 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 LCA5Q86VQ0 697 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 NUDCD3Q8IVD9 361 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 DCLK2Q8N568 766 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.98□□□□□ -0.81
USP39-214ENST00000474572 SPATA22Q8NHS9 363 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 USP33Q8TEY7 942 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 SH3TC2Q8TF17 1288 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 INPP5DQ92835 1189 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 ERP27Q96DN0 273 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 IMP4Q96G21 291 aaKnown RBP9.98□□□□□ -0.81
USP39-214ENST00000474572 MRGPRX2Q96LB1 330 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 LRRC37BQ96QE4 947 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 RANBP9Q96S59 729 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 CDK5RAP1Q96SZ6 601 aaKnown RBP9.98□□□□□ -0.81
USP39-214ENST00000474572 GPR22Q99680 433 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 TTPALQ9BTX7 342 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 MECRQ9BV79 373 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 FICDQ9BVA6 458 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 SLC13A1Q9BZW2 595 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 SLC25A51Q9H1U9 297 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 LRMDAQ9H2I8 198 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 CWH43Q9H720 699 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 NPHS2Q9NP85 383 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 SAR1AQ9NR31 198 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 SNX15Q9NRS6 342 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 TXLNGQ9NUQ3 528 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 RBM22Q9NW64 420 aaKnown RBP eCLIP9.98□□□□□ -0.81
USP39-214ENST00000474572 MPP6Q9NZW5 540 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 MARCH2Q9P0N8 246 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 MTO1Q9Y2Z2 717 aaKnown RBP9.98□□□□□ -0.81
USP39-214ENST00000474572 TCAF1Q9Y4C2 921 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 OBSL1O75147 1896 aa9.98□□□□□ -0.81
USP39-214ENST00000474572 TBKBP1A7MCY6 615 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 HNRNPCL1O60812 293 aaKnown RBP9.97□□□□□ -0.81
USP39-214ENST00000474572 SOAT2O75908 522 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 TOP3BO95985 862 aaKnown RBP9.97□□□□□ -0.81
USP39-214ENST00000474572 MT-CYBP00156 380 aaPredicted RBP9.97□□□□□ -0.81
USP39-214ENST00000474572 T-ENOLP0DO92 83 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 FGF3P11487 239 aaPredicted RBP9.97□□□□□ -0.81
USP39-214ENST00000474572 ARCN1P48444 511 aaKnown RBP9.97□□□□□ -0.81
USP39-214ENST00000474572 POLD2P49005 469 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 MAPKAPK2P49137 400 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms