RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 PRR20DP86480 221 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 PRR20BP86481 221 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 PRR20AP86496 221 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 CYP27A1Q02318 531 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 IL24Q13007 206 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 GPS1Q13098 491 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 PPIL2Q13356 520 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 THOC5Q13769 683 aaKnown RBP6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 TBCELQ5QJ74 424 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 CLVS2Q5SYC1 327 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 SLC9C2Q5TAH2 1124 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 AFMIDQ63HM1 303 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 SPECC1LQ69YQ0 1117 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 TRAT1Q6PIZ9 186 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 TPGS1Q6ZTW0 290 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 FKBP9P1Q75LS8 142 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 SV2BQ7L1I2 683 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 TTC6Q86TZ1 520 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 DENND1CQ8IV53 801 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 ZCCHC7Q8N3Z6 543 aaKnown RBP6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 CCNYL1Q8N7R7 359 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 BANPQ8N9N5 519 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 PRCCQ92733 491 aaPredicted RBP6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 THRSPQ92748 146 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 ABHD17AQ96GS6 310 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 HES6Q96HZ4 224 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 MOV10L1Q9BXT6 1211 aaKnown RBP6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 LRRC3Q9BY71 257 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 DCLK3Q9C098 648 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 TMEM206Q9H813 350 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 SLC52A2Q9HAB3 445 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 FAM53CQ9NYF3 392 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 TMOD3Q9NYL9 352 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 SERPINB13Q9UIV8 391 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 CCL27Q9Y4X3 112 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 ELP1O95163 1332 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 A0A1W2PRU2 124 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 DBX1A6NMT0 343 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 SNTNA6NMZ2 147 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 AHRRA9YTQ3 701 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 ATXN7O15265 892 aaPredicted RBP6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 B3GALT2O43825 422 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 TLR2O60603 784 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 FTCDO95954 541 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 INHBAP08476 426 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 SERPINF2P08697 491 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 RARBP10826 455 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 PCSK2P16519 638 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 SERPINF1P36955 418 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 EIF2DP41214 584 aaKnown RBP6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 CCR5P51681 352 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 POLE2P56282 527 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 SCAND1P57086 179 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 TAS2R40P59535 323 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 LACTBP83111 547 aaPredicted RBP6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 GSTM4Q03013 218 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 CREMQ03060 361 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 PPATQ06203 517 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 CXCL9Q07325 125 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 ZNF543Q08ER8 600 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 MAMLD1Q13495 774 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 PMS2P11Q13670 270 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 RRS1Q15050 365 aaKnown RBP6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 SEC23BQ15437 767 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 MPEG1Q2M385 716 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 SPDYAQ5MJ70 313 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 SAPCD1Q5SSQ6 148 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 CEP85LQ5SZL2 805 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 THEM4Q5T1C6 240 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 FAXCQ5TGI0 409 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 NPNTQ6UXI9 565 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 RUFY4Q6ZNE9 571 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 LRRC69Q6ZNQ3 347 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 Q6ZVU0 165 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 UBE2R2Q712K3 238 aaPredicted RBP6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 ARMCX2Q7L311 632 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 DDX53Q86TM3 631 aaKnown RBP6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 CCDC12Q8WUD4 166 aaPredicted RBP6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 DPF2Q92785 391 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 FCRL4Q96PJ5 515 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 CDRT15Q96T59 188 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 CYTH2Q99418 400 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 EDEM2Q9BV94 578 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 PRDM13Q9H4Q3 707 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 NEK6Q9HC98 313 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 OBP2BQ9NPH6 170 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 PAK6Q9NQU5 681 aaPredicted RBP6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 VPS54Q9P1Q0 977 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 STK17AQ9UEE5 414 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 RPH3AQ9Y2J0 694 aaPredicted RBP6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 SNX13Q9Y5W8 968 aa6.22□□□□□ -1.41
SMARCE1-208ENST00000474246 TRAV20A0A0B4J274 112 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 C5orf51A6NDU8 294 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 LGALS16A8MUM7 142 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 TRIM38O00635 465 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 PCDH17O14917 1159 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 ZNF263O14978 683 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 MYO1DO94832 1006 aa6.21□□□□□ -1.42
SMARCE1-208ENST00000474246 M6PRP20645 277 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms