RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 TARDBPQ13148 414 aaKnown RBP eCLIP13.72□□□□□ -0.213e-6■■■■□ 20.1
COPS7B-219ENST00000474042 STAT4Q14765 748 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 DPY19L2P1Q6NXN4 242 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 NEK5Q6P3R8 708 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 SETD3Q86TU7 594 aaPredicted RBP13.72□□□□□ -0.21
COPS7B-219ENST00000474042 FAM71AQ8IYT1 594 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 CACTIN-AS1Q8N1I8 211 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 OR2A12Q8NGT7 310 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 ARRDC3Q96B67 414 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 C2orf49Q9BVC5 232 aaPredicted RBP13.72□□□□□ -0.21
COPS7B-219ENST00000474042 NRSN2Q9GZP1 204 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 TKTL2Q9H0I9 626 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 SIK2Q9H0K1 926 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 MUC3BQ9H195 1237 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 PLCB1Q9NQ66 1216 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 DNAJC12Q9UKB3 198 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 CA5BQ9Y2D0 317 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 COL27A1Q8IZC6 1860 aaPredicted RBP13.72□□□□□ -0.21
COPS7B-219ENST00000474042 PTPRQQ9UMZ3 2332 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 DRGXA6NNA5 263 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 K7ERQ8 282 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 RNF103O00237 685 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 FOXN3O00409 490 aaPredicted RBP13.71□□□□□ -0.21
COPS7B-219ENST00000474042 TRIM38O00635 465 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 SDC3O75056 442 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 ZNF18P17022 549 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 RRM1P23921 792 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 CHRNA3P32297 505 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 KRT9P35527 623 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 SULT1E1P49888 294 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 MAN2A1Q16706 1144 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 ZNF284Q2VY69 593 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 C22orf39Q6P5X5 142 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 BNIPLQ7Z465 357 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 HORMAD1Q86X24 394 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 TMIEQ8NEW7 156 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 SNIP1Q8TAD8 396 aaKnown RBP13.71□□□□□ -0.21
COPS7B-219ENST00000474042 CCDC114Q96M63 670 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 DCBLD2Q96PD2 775 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 SYNCQ9H7C4 482 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.71□□□□□ -0.21
COPS7B-219ENST00000474042 ZNF212Q9UDV6 495 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 STAP1Q9ULZ2 295 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 SNX10Q9Y5X0 201 aa13.71□□□□□ -0.21
COPS7B-219ENST00000474042 TDRD6O60522 2096 aaKnown RBP13.71□□□□□ -0.21
COPS7B-219ENST00000474042 TRPM6Q9BX84 2022 aa13.71□□□□□ -0.22
COPS7B-219ENST00000474042 A0A0D9SEW6 157 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 A0A1W2PQU0 124 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 KPNA3O00505 521 aaPredicted RBP13.7□□□□□ -0.22
COPS7B-219ENST00000474042 SMAD6O43541 496 aaKnown RBP13.7□□□□□ -0.22
COPS7B-219ENST00000474042 BNIP3LO60238 219 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 THEGLP0DJG4 465 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 GIMD1P0DJR0 217 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 PRLRP16471 622 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 EIF2S3P41091 472 aaKnown RBP13.7□□□□□ -0.22
COPS7B-219ENST00000474042 MTIF2P46199 727 aaKnown RBP13.7□□□□□ -0.22
COPS7B-219ENST00000474042 GABRB2P47870 512 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 INSM1Q01101 510 aaPredicted RBP13.7□□□□□ -0.22
COPS7B-219ENST00000474042 DEUP1Q05D60 604 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 ZNF211Q13398 564 aaPredicted RBP13.7□□□□□ -0.22
COPS7B-219ENST00000474042 TMEM259Q4ZIN3 620 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 ACBD5Q5T8D3 534 aaPredicted RBP13.7□□□□□ -0.22
COPS7B-219ENST00000474042 GCNT7Q6ZNI0 430 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 SLC25A45Q8N413 288 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 DCBLD1Q8N8Z6 715 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 ATP11CQ8NB49 1132 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 CHST14Q8NCH0 376 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 TMEM35BQ8NCS4 154 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 OR4C6Q8NH72 309 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 KLHDC7BQ96G42 594 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 TBCBQ99426 244 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 MYOCQ99972 504 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 WDCPQ9H6R7 721 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 GPR27Q9NS67 375 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 KLHL11Q9NVR0 708 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 TMEM51Q9NW97 253 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 ZFR2Q9UPR6 939 aaKnown RBP13.7□□□□□ -0.22
COPS7B-219ENST00000474042 FARP1Q9Y4F1 1045 aaPredicted RBP13.7□□□□□ -0.22
COPS7B-219ENST00000474042 PAXBP1Q9Y5B6 917 aa13.7□□□□□ -0.22
COPS7B-219ENST00000474042 SHROOM3Q8TF72 1996 aa13.69□□□□□ -0.22
COPS7B-219ENST00000474042 SLC31A1O15431 190 aa13.69□□□□□ -0.22
COPS7B-219ENST00000474042 SIGLEC6O43699 453 aa13.69□□□□□ -0.22
COPS7B-219ENST00000474042 F9P00740 461 aa13.69□□□□□ -0.22
COPS7B-219ENST00000474042 PRNPP04156 253 aa13.69□□□□□ -0.22
COPS7B-219ENST00000474042 HNRNPA2B1P22626 353 aaKnown RBP13.69□□□□□ -0.22
COPS7B-219ENST00000474042 GLDCP23378 1020 aa13.69□□□□□ -0.22
COPS7B-219ENST00000474042 DGKAP23743 735 aa13.69□□□□□ -0.22
COPS7B-219ENST00000474042 AKT2P31751 481 aa13.69□□□□□ -0.22
COPS7B-219ENST00000474042 BPIFB4P59827 614 aa13.69□□□□□ -0.22
COPS7B-219ENST00000474042 CCDC15Q0P6D6 951 aa13.69□□□□□ -0.22
COPS7B-219ENST00000474042 KCNMA1Q12791 1236 aa13.69□□□□□ -0.22
COPS7B-219ENST00000474042 SLC25A52Q3SY17 297 aa13.69□□□□□ -0.22
COPS7B-219ENST00000474042 MIIPQ5JXC2 388 aa13.69□□□□□ -0.22
COPS7B-219ENST00000474042 TRNP1Q6NT89 227 aa13.69□□□□□ -0.22
COPS7B-219ENST00000474042 LINGO4Q6UY18 593 aa13.69□□□□□ -0.22
COPS7B-219ENST00000474042 ZNF783Q6ZMS7 281 aa13.69□□□□□ -0.22
COPS7B-219ENST00000474042 TFAP2DQ7Z6R9 452 aa13.69□□□□□ -0.22
COPS7B-219ENST00000474042 ABI3BPQ7Z7G0 1075 aa13.69□□□□□ -0.22
COPS7B-219ENST00000474042 XYLT1Q86Y38 959 aa13.69□□□□□ -0.22
COPS7B-219ENST00000474042 CREBRFQ8IUR6 639 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms