RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 RAB6CQ9H0N0 254 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 NEUROG2Q9H2A3 272 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 CATSPERBQ9H7T0 1116 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 AASDHPPTQ9NRN7 309 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 TAS2R14Q9NYV8 317 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 AIPL1Q9NZN9 384 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 CNOT8Q9UFF9 292 aaKnown RBP11.8□□□□□ -0.52
CPNE1-222ENST00000473373 LUC7L2Q9Y383 392 aaKnown RBP11.8□□□□□ -0.52
CPNE1-222ENST00000473373 PCDHB9Q9Y5E1 797 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.8□□□□□ -0.52
CPNE1-222ENST00000473373 TRPM6Q9BX84 2022 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 DRGXA6NNA5 263 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 ATP9BO43861 1147 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 RAMP2O60895 175 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 LRIG2O94898 1065 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 CER1O95813 267 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 SRCP12931 536 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 GOT1P17174 413 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 MAPKAPK2P49137 400 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 AFF3P51826 1226 aaKnown RBP11.79□□□□□ -0.52
CPNE1-222ENST00000473373 HDAC4P56524 1084 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 GEMIN4P57678 1058 aaKnown RBP11.79□□□□□ -0.52
CPNE1-222ENST00000473373 TPI1P60174 286 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 SHC2P98077 582 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 GRIK2Q13002 908 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 ARID5BQ14865 1188 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 POLD3Q15054 466 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-222ENST00000473373 C5orf22Q49AR2 442 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 PEAR1Q5VY43 1037 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-222ENST00000473373 KIAA0895LQ68EN5 471 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 C22orf39Q6P5X5 142 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 NCEH1Q6PIU2 408 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 IL27RAQ6UWB1 636 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 ZNF783Q6ZMS7 281 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 ZNF571Q7Z3V5 609 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-222ENST00000473373 PAF1Q8N7H5 531 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 OR2I1PQ8NGU4 316 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 OR2T34Q8NGX1 318 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 PIP4K2CQ8TBX8 421 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 GRIN3AQ8TCU5 1115 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 BIRC7Q96CA5 298 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 PPP1R16AQ96I34 528 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 ZDHHC5Q9C0B5 715 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 OSBPL2Q9H1P3 480 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 TNKS2Q9H2K2 1166 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 DEF6Q9H4E7 631 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 MRPL47Q9HD33 250 aaKnown RBP11.79□□□□□ -0.52
CPNE1-222ENST00000473373 PPARGC1AQ9UBK2 798 aaKnown RBP11.79□□□□□ -0.52
CPNE1-222ENST00000473373 FZD4Q9ULV1 537 aa11.79□□□□□ -0.52
CPNE1-222ENST00000473373 BZW2Q9Y6E2 419 aaKnown RBP11.79□□□□□ -0.52
CPNE1-222ENST00000473373 CNOT1A5YKK6 2376 aaKnown RBP11.79□□□□□ -0.52
CPNE1-222ENST00000473373 IGLV3-10A0A075B6K4 115 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 C1QTNF9BB2RNN3 333 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 I6L893 689 aaPredicted RBP11.78□□□□□ -0.52
CPNE1-222ENST00000473373 PLK4O00444 970 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 GIPC1O14908 333 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 ALOX15BO15296 676 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 PRPSAP2O60256 369 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 PRNPP04156 253 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 PROS1P07225 676 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 C1QTNF9P0C862 333 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 MYBL1P10243 752 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 RHOQP17081 205 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 GLDCP23378 1020 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 SSR1P43307 286 aaKnown RBP11.78□□□□□ -0.52
CPNE1-222ENST00000473373 CLCN6P51797 869 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 GALCP54803 685 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 AIF1P55008 147 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 ZBED6P86452 979 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 SLC45A4Q5BKX6 768 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 FIGNQ5HY92 759 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 PRPF39Q86UA1 669 aaKnown RBP11.78□□□□□ -0.52
CPNE1-222ENST00000473373 DNAAF5Q86Y56 855 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 RNF214Q8ND24 703 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 DEFB124Q8NES8 71 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 DNASE2BQ8WZ79 361 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 NTAN1Q96AB6 310 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 ALG14Q96F25 216 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 FAM129BQ96TA1 746 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 PSMB7Q99436 277 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 TM6SF2Q9BZW4 377 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 XPO4Q9C0E2 1151 aaKnown RBP11.78□□□□□ -0.52
CPNE1-222ENST00000473373 DHX35Q9H5Z1 703 aaKnown RBP11.78□□□□□ -0.52
CPNE1-222ENST00000473373 ZDHHC6Q9H6R6 413 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 CAPN10Q9HC96 672 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 ZNHIT6Q9NWK9 470 aaKnown RBP11.78□□□□□ -0.52
CPNE1-222ENST00000473373 DONSONQ9NYP3 566 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 SERGEFQ9UGK8 458 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 IL36AQ9UHA7 158 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 PCSK1NQ9UHG2 260 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 HS3ST2Q9Y278 367 aa11.78□□□□□ -0.52
CPNE1-222ENST00000473373 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.78□□□□□ -0.52
CPNE1-222ENST00000473373 A0A1B0GVT2 93 aa11.77□□□□□ -0.53
CPNE1-222ENST00000473373 A0A1W2PQJ5 194 aa11.77□□□□□ -0.53
CPNE1-222ENST00000473373 FAM72CH0Y354 149 aa11.77□□□□□ -0.53
CPNE1-222ENST00000473373 K7ERQ8 282 aa11.77□□□□□ -0.53
CPNE1-222ENST00000473373 EEF2KO00418 725 aaKnown RBP11.77□□□□□ -0.53
CPNE1-222ENST00000473373 CDX4O14627 284 aaPredicted RBP11.77□□□□□ -0.53
CPNE1-222ENST00000473373 MCF2LO15068 1137 aa11.77□□□□□ -0.53
CPNE1-222ENST00000473373 BUB1O43683 1085 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms