RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 PLK1P53350 603 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 INHBCP55103 352 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 NFKB2Q00653 900 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 KCNMA1Q12791 1236 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 OVGP1Q12889 678 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 ELAVL3Q14576 367 aaKnown RBP9.59□□□□□ -0.87
VCL-204ENST00000472585 STAT4Q14765 748 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 ZNF542PQ5EBM4 170 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 DCAF17Q5H9S7 520 aaPredicted RBP9.59□□□□□ -0.87
VCL-204ENST00000472585 ARTNQ5T4W7 220 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 PIP5KL1Q5T9C9 394 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 TCERG1LQ5VWI1 586 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 DENND1BQ6P3S1 775 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 FOXR1Q6PIV2 292 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 RRAGAQ7L523 313 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 C14orf80Q86SX3 495 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 LAPTM4BQ86VI4 370 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 IQCHQ86VS3 1027 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 TRIM69Q86WT6 500 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 ARHGEF19Q8IW93 802 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 CCAR2Q8N163 923 aaKnown RBP9.59□□□□□ -0.87
VCL-204ENST00000472585 SLC22A18ASQ8N1D0 253 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 EXD3Q8N9H8 876 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 OR4C6Q8NH72 309 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 WNT2BQ93097 391 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 SNX21Q969T3 373 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 PRR11Q96HE9 360 aaPredicted RBP9.59□□□□□ -0.87
VCL-204ENST00000472585 KREMEN1Q96MU8 473 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 SPAG5Q96R06 1193 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 CCNL2Q96S94 520 aaPredicted RBP9.59□□□□□ -0.87
VCL-204ENST00000472585 FZD3Q9NPG1 666 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 ACP6Q9NPH0 428 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 SATB2Q9UPW6 733 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 PCDHB4Q9Y5E5 795 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 KIF26BQ2KJY2 2108 aa9.59□□□□□ -0.87
VCL-204ENST00000472585 USP9YO00507 2555 aaPredicted RBP9.58□□□□□ -0.88
VCL-204ENST00000472585 K7ERQ8 282 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 MCF2LO15068 1137 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 FFAR2O15552 330 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 SUV39H1O43463 412 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 STX10O60499 249 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 NEBLO76041 1014 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 ZNF202O95125 648 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 TRUB2O95900 331 aaKnown RBP9.58□□□□□ -0.88
VCL-204ENST00000472585 GP1BAP07359 652 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 THEGLP0DJG4 465 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 CKMT1AP12532 417 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 CLDN2P57739 230 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 CENPCQ03188 943 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 NNTQ13423 1086 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 PNOCQ13519 176 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 UBAP2LQ14157 1087 aaKnown RBP9.58□□□□□ -0.88
VCL-204ENST00000472585 DLG2Q15700 870 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 ZNF284Q2VY69 593 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 ARL13BQ3SXY8 428 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 TPRG1LQ5T0D9 272 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 FBXL22Q6P050 247 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 IGF2-ASQ6U949 168 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 Q6ZVU0 165 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 USP53Q70EK8 1073 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 ARL14Q8N4G2 192 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 ZNF557Q8N988 423 aaPredicted RBP9.58□□□□□ -0.88
VCL-204ENST00000472585 OR13H1Q8NG92 308 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 MAPK15Q8TD08 544 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 ERCC4Q92889 916 aaPredicted RBP9.58□□□□□ -0.88
VCL-204ENST00000472585 ARRDC3Q96B67 414 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 KLHDC7BQ96G42 594 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 BMFQ96LC9 184 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 APOLD1Q96LR9 279 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 SLC46A1Q96NT5 459 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 SERPINB11Q96P15 392 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 DDX50Q9BQ39 737 aaKnown RBP9.58□□□□□ -0.88
VCL-204ENST00000472585 FEM1AQ9BSK4 669 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 KDM4CQ9H3R0 1056 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 ANLNQ9NQW6 1124 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 NPDC1Q9NQX5 325 aaPredicted RBP9.58□□□□□ -0.88
VCL-204ENST00000472585 STARD5Q9NSY2 213 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 KLHL11Q9NVR0 708 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 KLF15Q9UIH9 416 aa9.58□□□□□ -0.88
VCL-204ENST00000472585 ZFR2Q9UPR6 939 aaKnown RBP9.58□□□□□ -0.88
VCL-204ENST00000472585 UTP20O75691 2785 aaKnown RBP9.58□□□□□ -0.88
VCL-204ENST00000472585 NYNRINQ9P2P1 1898 aaKnown RBP9.57□□□□□ -0.88
VCL-204ENST00000472585 A0A1W2PQU0 124 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 PRAMEF26H0Y7S4 382 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 I6L893 689 aaPredicted RBP9.57□□□□□ -0.88
VCL-204ENST00000472585 SLC16A3O15427 465 aaKnown RBP9.57□□□□□ -0.88
VCL-204ENST00000472585 EFSO43281 561 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 SMAD6O43541 496 aaKnown RBP9.57□□□□□ -0.88
VCL-204ENST00000472585 RNGTTO60942 597 aaKnown RBP9.57□□□□□ -0.88
VCL-204ENST00000472585 PIAS2O75928 621 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 FBXO21O94952 628 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 GJB6O95452 261 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 TGM2P21980 687 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 NUDT1P36639 197 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 GGCXP38435 758 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 FMO5P49326 533 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 SKOR1P84550 965 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 FGL2Q14314 439 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 ISXQ2M1V0 245 aa9.57□□□□□ -0.88
VCL-204ENST00000472585 C4orf17Q53FE4 359 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms