RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 PRKD2Q9BZL6 878 aa9.57□□□□□ -0.88
VPS52-216ENST00000471309 CENPHQ9H3R5 247 aa9.57□□□□□ -0.88
VPS52-216ENST00000471309 ACSS3Q9H6R3 686 aa9.57□□□□□ -0.88
VPS52-216ENST00000471309 GLOD4Q9HC38 313 aa9.57□□□□□ -0.88
VPS52-216ENST00000471309 CASS4Q9NQ75 786 aa9.57□□□□□ -0.88
VPS52-216ENST00000471309 RBM22Q9NW64 420 aaKnown RBP eCLIP9.57□□□□□ -0.88
VPS52-216ENST00000471309 HCFC1R1Q9NWW0 138 aa9.57□□□□□ -0.88
VPS52-216ENST00000471309 EURLQ9NYK6 297 aa9.57□□□□□ -0.88
VPS52-216ENST00000471309 CFAP97Q9P2B7 532 aa9.57□□□□□ -0.88
VPS52-216ENST00000471309 DNMT3BQ9UBC3 853 aaKnown RBP9.57□□□□□ -0.88
VPS52-216ENST00000471309 ZC3H7BQ9UGR2 993 aaKnown RBP9.57□□□□□ -0.88
VPS52-216ENST00000471309 SH3BP1Q9Y3L3 701 aa9.57□□□□□ -0.88
VPS52-216ENST00000471309 HCFC2Q9Y5Z7 792 aa9.57□□□□□ -0.88
VPS52-216ENST00000471309 NUP210Q8TEM1 1887 aaPredicted RBP9.56□□□□□ -0.88
VPS52-216ENST00000471309 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.56□□□□□ -0.88
VPS52-216ENST00000471309 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.56□□□□□ -0.88
VPS52-216ENST00000471309 SMIM23A6NLE4 172 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 J3KR12 359 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 NRG2O14511 850 aaPredicted RBP9.56□□□□□ -0.88
VPS52-216ENST00000471309 RGS16O15492 202 aaPredicted RBP9.56□□□□□ -0.88
VPS52-216ENST00000471309 MOSPD3O75425 235 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 NEBLO76041 1014 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 RHOP08100 348 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 RHOCP08134 193 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 GJA1P17302 382 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 NR1D1P20393 614 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 HOXD9P28356 352 aaPredicted RBP9.56□□□□□ -0.88
VPS52-216ENST00000471309 ATP5DP30049 168 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 STX2P32856 288 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 ACVRL1P37023 503 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 GRIA1P42261 906 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 GEMP55040 296 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 OXCT1P55809 520 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 SLC10A7Q0GE19 358 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 MTM1Q13496 603 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 TEAD2Q15562 447 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 DUSP6Q16828 381 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 PRSS36Q5K4E3 855 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 GPR158Q5T848 1215 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 TMCO4Q5TGY1 634 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 EMC10Q5UCC4 262 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 MARC1Q5VT66 337 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 PPP2R2DQ66LE6 453 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 STEAP4Q687X5 459 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 KCTD16Q68DU8 428 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 NAPEPLDQ6IQ20 393 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 CXorf57Q6NSI4 855 aaKnown RBP9.56□□□□□ -0.88
VPS52-216ENST00000471309 KDM7AQ6ZMT4 941 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 CAPN12Q6ZSI9 719 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 LINC00523Q86TU6 105 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 ZNF354CQ86Y25 554 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 SH2D3CQ8N5H7 860 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 ZNF707Q96C28 371 aaPredicted RBP9.56□□□□□ -0.88
VPS52-216ENST00000471309 PABPC5Q96DU9 382 aaKnown RBP9.56□□□□□ -0.88
VPS52-216ENST00000471309 STAMBPL1Q96FJ0 436 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 IMP4Q96G21 291 aaKnown RBP9.56□□□□□ -0.88
VPS52-216ENST00000471309 OXNAD1Q96HP4 312 aaPredicted RBP9.56□□□□□ -0.88
VPS52-216ENST00000471309 CYTH2Q99418 400 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 EBNA1BP2Q99848 306 aaKnown RBP9.56□□□□□ -0.88
VPS52-216ENST00000471309 GDF15Q99988 308 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 NAT9Q9BTE0 207 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 ACE2Q9BYF1 805 aaPredicted RBP9.56□□□□□ -0.88
VPS52-216ENST00000471309 NKX2-4Q9H2Z4 354 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 TASP1Q9H6P5 420 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 HAUS2Q9NVX0 235 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 SLC24A2Q9UI40 661 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 RABGEF1Q9UJ41 708 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 MSRAQ9UJ68 235 aa9.56□□□□□ -0.88
VPS52-216ENST00000471309 TCRBV9S1A1TA0A576 114 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 E2F8A0AVK6 867 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 TLDC2A0PJX2 215 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 SDR42E2A6NKP2 422 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 LEFTY2O00292 366 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 ZNF197O14709 1029 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 TRDMT1O14717 391 aaKnown RBP9.55□□□□□ -0.88
VPS52-216ENST00000471309 KDELR3O43731 214 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 TSPAN3O60637 253 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 TBL1XO60907 577 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 LUC7L3O95232 432 aaKnown RBP9.55□□□□□ -0.88
VPS52-216ENST00000471309 TCF3P15923 654 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 PGAM1P18669 254 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 MGAT1P26572 445 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 GCAP28676 217 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 AVPR1AP37288 418 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 SLCO1A2P46721 670 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 GEMIN4P57678 1058 aaKnown RBP9.55□□□□□ -0.88
VPS52-216ENST00000471309 MPP3Q13368 585 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 SPARCL1Q14515 664 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 RFTN1Q14699 578 aaPredicted RBP9.55□□□□□ -0.88
VPS52-216ENST00000471309 LBRQ14739 615 aaKnown RBP9.55□□□□□ -0.88
VPS52-216ENST00000471309 SLC5A9Q2M3M2 681 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 MPP7Q5T2T1 576 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 ARMC3Q5W041 872 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 RNF43Q68DV7 783 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 ALG1LQ6GMV1 187 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 UNC5AQ6ZN44 842 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 C3orf62Q6ZUJ4 267 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 OTOP3Q7RTS5 596 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 ADGRD2Q7Z7M1 963 aa9.55□□□□□ -0.88
VPS52-216ENST00000471309 CCDC117Q8IWD4 279 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms