RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 LRRC63Q05C16 580 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 CETN1Q12798 172 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 NR6A1Q15406 480 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 ZRSR2Q15696 482 aaKnown RBP6.06□□□□□ -1.44
VARS-222ENST00000470953 SGSM1Q2NKQ1 1148 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 ZACNQ401N2 412 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 TTC31Q49AM3 519 aaPredicted RBP6.06□□□□□ -1.44
VARS-222ENST00000470953 ZNF542PQ5EBM4 170 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 ZNF776Q68DI1 518 aaPredicted RBP6.06□□□□□ -1.44
VARS-222ENST00000470953 ISM2Q6H9L7 571 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 NAPEPLDQ6IQ20 393 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 ASB18Q6ZVZ8 466 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 USP30Q70CQ3 517 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 CREBRFQ8IUR6 639 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 FBXO39Q8N4B4 442 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 AADATQ8N5Z0 425 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 B3GALNT2Q8NCR0 500 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 PDZD8Q8NEN9 1154 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 PARD3BQ8TEW8 1205 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 OVCA2Q8WZ82 227 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 TAF4BQ92750 862 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 JAKMIP2Q96AA8 810 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 EEF2KMTQ96G04 330 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 SMARCD1Q96GM5 515 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 TIGD1Q96MW7 591 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 CATSPER2Q96P56 530 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 B3GNT5Q9BYG0 378 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 NIF3L1Q9GZT8 377 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 RSPH9Q9H1X1 276 aaPredicted RBP6.06□□□□□ -1.44
VARS-222ENST00000470953 TMEM8AQ9HCN3 771 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 PREBQ9HCU5 417 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 DMAP1Q9NPF5 467 aaPredicted RBP6.06□□□□□ -1.44
VARS-222ENST00000470953 FAM49BQ9NUQ9 324 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 NLGN3Q9NZ94 848 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 IL37Q9NZH6 218 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 ARMCX3Q9UH62 379 aaPredicted RBP6.06□□□□□ -1.44
VARS-222ENST00000470953 NCKAP1Q9Y2A7 1128 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 PCDHB11Q9Y5F2 797 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 PCDHGB6Q9Y5F9 930 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 PCDHA5Q9Y5H7 936 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 FAM92AA1XBS5 289 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 TRIM49BA6NDI0 452 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 LRRC72A6NJI9 287 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 IKBKBO14920 756 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 NKX2-8O15522 239 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 DUX1O43812 170 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 SIN3BO75182 1162 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 AP1G2O75843 785 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 STC2O76061 302 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 FGFR1OPO95684 399 aaKnown RBP6.05□□□□□ -1.44
VARS-222ENST00000470953 STAU1O95793 577 aaKnown RBP6.05□□□□□ -1.44
VARS-222ENST00000470953 FAM200BP0CF97 657 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 PRKAR1AP10644 381 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 LIFP15018 202 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 BPIP17213 487 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 PTPN1P18031 435 aaKnown RBP6.05□□□□□ -1.44
VARS-222ENST00000470953 ITGA3P26006 1051 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 ADORA2BP29275 332 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 HLA-FP30511 346 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 GTF2H1P32780 548 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 ETV5P41161 510 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 PRCPP42785 496 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 ADPRHP54922 357 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 SLC8A3P57103 927 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 RNASE9P60153 205 aaKnown RBP6.05□□□□□ -1.44
VARS-222ENST00000470953 YWHAEP62258 255 aaKnown RBP6.05□□□□□ -1.44
VARS-222ENST00000470953 DLG4P78352 724 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 ARID5AQ03989 594 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 KCNMA1Q12791 1236 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 FOXD4Q12950 439 aaPredicted RBP6.05□□□□□ -1.44
VARS-222ENST00000470953 PAK1Q13153 545 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 EIF4HQ15056 248 aaKnown RBP6.05□□□□□ -1.44
VARS-222ENST00000470953 INPP5JQ15735 1006 aaPredicted RBP6.05□□□□□ -1.44
VARS-222ENST00000470953 NFIL3Q16649 462 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 TPD52L1Q16890 204 aaPredicted RBP6.05□□□□□ -1.44
VARS-222ENST00000470953 HS1BP3Q53T59 392 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 SLC45A4Q5BKX6 768 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 KRT39Q6A163 491 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 SPOPLQ6IQ16 392 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 ACOT1Q86TX2 421 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 FAM35AQ86V20 835 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 ADIPOR2Q86V24 386 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 MMAAQ8IVH4 418 aaKnown RBP6.05□□□□□ -1.44
VARS-222ENST00000470953 FBXL13Q8NEE6 735 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 OR14C36Q8NHC7 312 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 PLEKHO2Q8TD55 490 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 NELFBQ8WX92 580 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 ZNF516Q92618 1163 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 GBP4Q96PP9 640 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 FOXP3Q9BZS1 431 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 NMUR1Q9HB89 426 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 EPB41L5Q9HCM4 733 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 DMAC2Q9NW81 257 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 PISDQ9UG56 409 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 MAN1B1Q9UKM7 699 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 TLN2Q9Y4G6 2542 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 UNC13CQ8NB66 2214 aa6.05□□□□□ -1.44
VARS-222ENST00000470953 TNRC6AQ8NDV7 1962 aaKnown RBP6.04□□□□□ -1.44
VARS-222ENST00000470953 TBC1D3DA0A087WVF3 549 aa6.04□□□□□ -1.44
VARS-222ENST00000470953 TBC1D3IA0A087WXS9 549 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms