RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 NR2C2P49116 596 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 SLC11A2P49281 568 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 EPHA5P54756 1037 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 TPI1P60174 286 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 RBM10P98175 930 aaKnown RBP6.83□□□□□ -1.32
VAMP3-202ENST00000470357 C2orf54Q08AI8 447 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 EFEMP1Q12805 493 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 KLF1Q13351 362 aaPredicted RBP6.83□□□□□ -1.32
VAMP3-202ENST00000470357 EIF4EBP2Q13542 120 aaPredicted RBP6.83□□□□□ -1.32
VAMP3-202ENST00000470357 KCNC3Q14003 757 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 DPYSL3Q14195 570 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 ATP13A4Q4VNC1 1196 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 ANKRD20A8PQ5CZ79 823 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 OTUD1Q5VV17 481 aaPredicted RBP6.83□□□□□ -1.32
VAMP3-202ENST00000470357 SLC9A4Q6AI14 798 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 TXNRD3NBQ6F5E7 133 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 LRRC31Q6UY01 552 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 CYP4V2Q6ZWL3 525 aaPredicted RBP6.83□□□□□ -1.32
VAMP3-202ENST00000470357 DDX42Q86XP3 938 aaKnown RBP eCLIP6.83□□□□□ -1.32
VAMP3-202ENST00000470357 RFX6Q8HWS3 928 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 LZTR1Q8N653 840 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 CCDC185Q8N715 623 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 VN1R2Q8NFZ6 395 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 CCHCR1Q8TD31 782 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 SLC22A17Q8WUG5 538 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 WFDC12Q8WWY7 111 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 P3H4Q92791 437 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 CASP10Q92851 521 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 SLCO2A1Q92959 643 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 MAGOHBQ96A72 148 aaKnown RBP6.83□□□□□ -1.32
VAMP3-202ENST00000470357 KLHDC7BQ96G42 594 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 SLC39A13Q96H72 371 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 DMRTB1Q96MA1 342 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 RIPOR3Q96MK2 946 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 AP1M1Q9BXS5 423 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 DCLK3Q9C098 648 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 TKTL2Q9H0I9 626 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 RAB17Q9H0T7 212 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 S1PR5Q9H228 398 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 CATSPERBQ9H7T0 1116 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 RBM12Q9NTZ6 932 aaKnown RBP6.83□□□□□ -1.32
VAMP3-202ENST00000470357 KCNK4Q9NYG8 393 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 PCYOX1Q9UHG3 505 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 SOX13Q9UN79 622 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 DRG1Q9Y295 367 aaKnown RBP6.83□□□□□ -1.32
VAMP3-202ENST00000470357 ZNF510Q9Y2H8 683 aa6.83□□□□□ -1.32
VAMP3-202ENST00000470357 NUP210Q8TEM1 1887 aaPredicted RBP6.83□□□□□ -1.32
VAMP3-202ENST00000470357 TPRP12270 2363 aaKnown RBP6.82□□□□□ -1.32
VAMP3-202ENST00000470357 UQCRHLA0A096LP55 91 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 TRAV19A0A0A6YYK7 116 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 SLC12A8A0AV02 714 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 CFAP69A5D8W1 941 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 KCNU1A8MYU2 1149 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 HACD1B0YJ81 288 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 PAGE1O75459 146 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 ALX3O95076 343 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 CSPG5O95196 566 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 PAPLNO95428 1278 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 ECEL1O95672 775 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 OAS1P00973 400 aaKnown RBP6.82□□□□□ -1.32
VAMP3-202ENST00000470357 ITGAVP06756 1048 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 UQCRHP07919 91 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 SPATA31D3P0C874 917 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 GABRR2P28476 465 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 STIP1P31948 543 aaKnown RBP6.82□□□□□ -1.32
VAMP3-202ENST00000470357 CD68P34810 354 aaPredicted RBP6.82□□□□□ -1.32
VAMP3-202ENST00000470357 ID4P47928 161 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 PITX1P78337 314 aaPredicted RBP6.82□□□□□ -1.32
VAMP3-202ENST00000470357 DR1Q01658 176 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 SEMA3BQ13214 749 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 XRCC4Q13426 336 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 DUSP6Q16828 381 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 ZC3H12AQ5D1E8 599 aaKnown RBP6.82□□□□□ -1.32
VAMP3-202ENST00000470357 KAZNQ674X7 775 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 CCDC137Q6PK04 289 aaKnown RBP6.82□□□□□ -1.32
VAMP3-202ENST00000470357 TMCO3Q6UWJ1 677 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 C4orf22Q6V702 233 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 SPATA31D4Q6ZUB0 917 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 RFX8Q6ZV50 586 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 MIB1Q86YT6 1006 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 LRRC49Q8IUZ0 686 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 IFT20Q8IY31 132 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 CCDC105Q8IYK2 499 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 TMEM105Q8N8V8 129 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 PRELID2Q8N945 189 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 EIF1ADQ8N9N8 165 aaKnown RBP6.82□□□□□ -1.32
VAMP3-202ENST00000470357 ATL2Q8NHH9 583 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.82□□□□□ -1.32
VAMP3-202ENST00000470357 NKD2Q969F2 451 aaPredicted RBP6.82□□□□□ -1.32
VAMP3-202ENST00000470357 CCDC74AQ96AQ1 378 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 ACSF2Q96CM8 615 aaPredicted RBP6.82□□□□□ -1.32
VAMP3-202ENST00000470357 FCRL2Q96LA5 508 aaPredicted RBP6.82□□□□□ -1.32
VAMP3-202ENST00000470357 CSPG4P5Q96PW8 444 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 KRT12Q99456 494 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 HEMGNQ9BXL5 484 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 FAM129AQ9BZQ8 928 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 BRD8Q9H0E9 1235 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 DDX47Q9H0S4 455 aaKnown RBP6.82□□□□□ -1.32
VAMP3-202ENST00000470357 CCSER2Q9H7U1 834 aa6.82□□□□□ -1.32
VAMP3-202ENST00000470357 SFXN1Q9H9B4 322 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms