RNA–Protein interactions for RNA: ENST00000470314.5

NINJ1-203, Transcript of ninjurin 1, humanhuman

TSL 3

Gene NINJ1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-203ENST00000470314 PRSS55Q6UWB4 352 aaPredicted RBP13.9□□□□□ -0.18
NINJ1-203ENST00000470314 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.9□□□□□ -0.18
NINJ1-203ENST00000470314 OTOAQ7RTW8 1153 aa13.9□□□□□ -0.18
NINJ1-203ENST00000470314 LCA5Q86VQ0 697 aa13.9□□□□□ -0.18
NINJ1-203ENST00000470314 TMEM173Q86WV6 379 aaPredicted RBP13.9□□□□□ -0.18
NINJ1-203ENST00000470314 CCDC63Q8NA47 563 aa13.9□□□□□ -0.18
NINJ1-203ENST00000470314 NSMCE1Q8WV22 266 aa13.9□□□□□ -0.18
NINJ1-203ENST00000470314 TADA1Q96BN2 335 aa13.9□□□□□ -0.18
NINJ1-203ENST00000470314 IMP4Q96G21 291 aaKnown RBP13.9□□□□□ -0.18
NINJ1-203ENST00000470314 TRMT2BQ96GJ1 504 aaKnown RBP13.9□□□□□ -0.18
NINJ1-203ENST00000470314 FAM111AQ96PZ2 611 aa13.9□□□□□ -0.18
NINJ1-203ENST00000470314 RANBP9Q96S59 729 aa13.9□□□□□ -0.18
NINJ1-203ENST00000470314 CLSTN3Q9BQT9 956 aa13.9□□□□□ -0.18
NINJ1-203ENST00000470314 TRIM56Q9BRZ2 755 aaKnown RBP13.9□□□□□ -0.18
NINJ1-203ENST00000470314 MCMBPQ9BTE3 642 aa13.9□□□□□ -0.18
NINJ1-203ENST00000470314 RASSF4Q9H2L5 321 aa13.9□□□□□ -0.18
NINJ1-203ENST00000470314 ATP13A1Q9HD20 1204 aa13.9□□□□□ -0.18
NINJ1-203ENST00000470314 SIRPGQ9P1W8 387 aa13.9□□□□□ -0.18
NINJ1-203ENST00000470314 SLC12A4Q9UP95 1085 aa13.9□□□□□ -0.18
NINJ1-203ENST00000470314 ZNF638Q14966 1978 aaKnown RBP13.9□□□□□ -0.18
NINJ1-203ENST00000470314 FNDC1Q4ZHG4 1894 aaPredicted RBP13.89□□□□□ -0.19
NINJ1-203ENST00000470314 ZNF840PA6NDX5 716 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 ANKRD65E5RJM6 399 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 F5H423 210 aaPredicted RBP13.89□□□□□ -0.19
NINJ1-203ENST00000470314 C2CD2LO14523 706 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 TIMM44O43615 452 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 ACSL4O60488 711 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 TLR5O60602 858 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 SIN3BO75182 1162 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 GLRA3O75311 464 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 DCTN3O75935 186 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 TROVE2P10155 538 aaKnown RBP eCLIP13.89□□□□□ -0.19
NINJ1-203ENST00000470314 ERVK-10P10266 1014 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 ATF6P18850 670 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 SKIV2L2P42285 1042 aaKnown RBP13.89□□□□□ -0.19
NINJ1-203ENST00000470314 ATN1P54259 1190 aaPredicted RBP13.89□□□□□ -0.19
NINJ1-203ENST00000470314 PDE1BQ01064 536 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 RAB33AQ14088 237 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 TRIM60Q495X7 471 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 HECTD3Q5T447 861 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 TMCO4Q5TGY1 634 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 KIAA1841Q6NSI8 718 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 CDHR3Q6ZTQ4 885 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 FAM47EQ6ZV65 393 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 DEFB128Q7Z7B8 93 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 RASSF3Q86WH2 238 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 C10orf67Q8IYJ2 551 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 UNC5BQ8IZJ1 945 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 STKLD1Q8NE28 680 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 GPR152Q8TDT2 470 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 IGSF8Q969P0 613 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 ZNF669Q96BR6 464 aaPredicted RBP13.89□□□□□ -0.19
NINJ1-203ENST00000470314 PLD4Q96BZ4 506 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 VWCEQ96DN2 955 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 C7orf26Q96N11 449 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 RBBP8Q99708 897 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 HERC2P3Q9BVR0 1158 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 PRKD2Q9BZL6 878 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 MAGEH1Q9H213 219 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 CHRAC1Q9NRG0 131 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 TMEM39AQ9NV64 488 aa13.89□□□□□ -0.19
NINJ1-203ENST00000470314 NUP205Q92621 2012 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 ATP9BO43861 1147 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 USP12O75317 370 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 SOAT2O75908 522 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 NEBLO76041 1014 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 PAPSS2O95340 614 aaPredicted RBP13.88□□□□□ -0.19
NINJ1-203ENST00000470314 EPOP01588 193 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 ALDOAP04075 364 aaKnown RBP13.88□□□□□ -0.19
NINJ1-203ENST00000470314 HLA-DQB2P05538 268 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 ATP5BP06576 529 aaKnown RBP13.88□□□□□ -0.19
NINJ1-203ENST00000470314 BPGMP07738 259 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 HMGA1P17096 107 aaKnown RBP13.88□□□□□ -0.19
NINJ1-203ENST00000470314 TACR2P21452 398 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 SLC11A2P49281 568 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 HARS2P49590 506 aaKnown RBP13.88□□□□□ -0.19
NINJ1-203ENST00000470314 LIMK2P53671 638 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 SERINC3Q13530 473 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 LAMB3Q13751 1172 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 SETDB1Q15047 1291 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 POLD3Q15054 466 aaPredicted RBP13.88□□□□□ -0.19
NINJ1-203ENST00000470314 SLC14A2Q15849 920 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 UGP2Q16851 508 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 ALFQ53S48 1182 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 RAP1GAP2Q684P5 730 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 KDELC1Q6UW63 502 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 DDX53Q86TM3 631 aaKnown RBP13.88□□□□□ -0.19
NINJ1-203ENST00000470314 NUDCD3Q8IVD9 361 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 CNTN4Q8IWV2 1026 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 CMTR2Q8IYT2 770 aaKnown RBP13.88□□□□□ -0.19
NINJ1-203ENST00000470314 SLC39A11Q8N1S5 342 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 MICALL1Q8N3F8 863 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 USP33Q8TEY7 942 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 GIPC2Q8TF65 315 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 E2F7Q96AV8 911 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 MRGPRX2Q96LB1 330 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 ZNF558Q96NG5 402 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 TUBB6Q9BUF5 446 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 TSSK1BQ9BXA7 367 aa13.88□□□□□ -0.19
NINJ1-203ENST00000470314 VN1R3Q9BXE9 311 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms