RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 PIWIL2Q8TC59 973 aaKnown RBP8.16□□□□□ -1.1
SMC4-212ENST00000470240 PTPRN2Q92932 1015 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 SLC7A6OSQ96CW6 309 aaPredicted RBP8.16□□□□□ -1.1
SMC4-212ENST00000470240 LPIN3Q9BQK8 851 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 CFHR5Q9BXR6 569 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 ZFYVE28Q9HCC9 887 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 SMYD2Q9NRG4 433 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 PIGVQ9NUD9 493 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 SYBUQ9NX95 663 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 ZDHHC3Q9NYG2 299 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 FBXW11Q9UKB1 542 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 TLK1Q9UKI8 766 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 ST3GAL5Q9UNP4 418 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 ANKRD6Q9Y2G4 727 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 GOLGA8QA0A0J9YX86 632 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 GOLGA8OA6NCC3 632 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 A8MUI8 341 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 GOLGA8NF8WBI6 632 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 PTGESO14684 152 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 LIN7AO14910 233 aaPredicted RBP8.15□□□□□ -1.1
SMC4-212ENST00000470240 ADCY6O43306 1168 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 PLIN3O60664 434 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 MAGEC1O60732 1142 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 SNNO75324 88 aaPredicted RBP8.15□□□□□ -1.1
SMC4-212ENST00000470240 C1QAP02745 245 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 ENO1P06733 434 aaKnown RBP8.15□□□□□ -1.1
SMC4-212ENST00000470240 THBS1P07996 1170 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 RPSAP08865 295 aaKnown RBP8.15□□□□□ -1.1
SMC4-212ENST00000470240 USP17L7P0C7H9 530 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 DNAJB1P25685 340 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 HOXC8P31273 242 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 SLC1A6P48664 564 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 POLD2P49005 469 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 LIMK2P53671 638 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 ALDH18A1P54886 795 aaKnown RBP8.15□□□□□ -1.1
SMC4-212ENST00000470240 GEMP55040 296 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 INHBEP58166 350 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 GRIK3Q13003 919 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 MPP3Q13368 585 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 RCN2Q14257 317 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 MUM1Q2TAK8 710 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 ANO4Q32M45 955 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 TRMT5Q32P41 509 aaKnown RBP8.15□□□□□ -1.1
SMC4-212ENST00000470240 TEX44Q53QW1 395 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 RAB41Q5JT25 222 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 TBCELQ5QJ74 424 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 SYPL2Q5VXT5 272 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 PDPK2PQ6A1A2 396 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 DCLRE1AQ6PJP8 1040 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 CDHR3Q6ZTQ4 885 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 BEND5Q7L4P6 421 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 BNIPLQ7Z465 357 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 STRA8Q7Z7C7 330 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 LRRC49Q8IUZ0 686 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.15□□□□□ -1.15e-13■■■■■ 348.1
SMC4-212ENST00000470240 AFAP1L2Q8N4X5 818 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 CCDC33Q8N5R6 958 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 GPATCH11Q8N954 259 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 PPHLN1Q8NEY8 458 aaKnown RBP8.15□□□□□ -1.1
SMC4-212ENST00000470240 OR52K1Q8NGK4 314 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 RDH11Q8TC12 318 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 PTCD3Q96EY7 689 aaKnown RBP8.15□□□□□ -1.1
SMC4-212ENST00000470240 PCED1BQ96HM7 432 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 GAD1Q99259 594 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 RBBP8Q99708 897 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 ACBD6Q9BR61 282 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 MECRQ9BV79 373 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 COLEC11Q9BWP8 271 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 OSBPL2Q9H1P3 480 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 CXCL16Q9H2A7 254 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 VCX3BQ9H321 246 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 C12orf65Q9H3J6 166 aaKnown RBP8.15□□□□□ -1.1
SMC4-212ENST00000470240 CASS4Q9NQ75 786 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 CRTAC1Q9NQ79 661 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 MRGBPQ9NV56 204 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 ARL8BQ9NVJ2 186 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 DNAJC28Q9NX36 388 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 L3MBTL1Q9Y468 752 aa8.15□□□□□ -1.1
SMC4-212ENST00000470240 YJEFN3A6XGL0 299 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 B2RBV5 119 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 F5H423 210 aaPredicted RBP8.14□□□□□ -1.11
SMC4-212ENST00000470240 KCNK1O00180 336 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 GSC2O15499 205 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 UGT1A9O60656 530 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 PEX11AO75192 247 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 SNUPNO95149 360 aaKnown RBP8.14□□□□□ -1.11
SMC4-212ENST00000470240 HSPA4LO95757 839 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 CTSHP09668 335 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 T-ENOLP0DO92 83 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 KITP10721 976 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 RALBP11234 206 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 CPA3P15088 417 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 VHLP40337 213 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 CXCR3P49682 368 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 ZNF157P51786 506 aaPredicted RBP8.14□□□□□ -1.11
SMC4-212ENST00000470240 HUNKP57058 714 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 ABCE1P61221 599 aaKnown RBP8.14□□□□□ -1.11
SMC4-212ENST00000470240 RPL10AP62906 217 aaKnown RBP8.14□□□□□ -1.11
SMC4-212ENST00000470240 AP2B1P63010 937 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 IRX4P78413 519 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms