RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 TESPA1A2RU30 521 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 A8MU76 341 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 B8ZZF3 427 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 TAF4O00268 1085 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 AURKAO14965 403 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 HDAC3O15379 428 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 MAN1A2O60476 641 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 RASAL1O95294 804 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 CDH1P12830 882 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 TCF4P15884 667 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 GSTM2P28161 218 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 CCND2P30279 289 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 PKLRP30613 574 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 ARRB2P32121 409 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 S100A5P33763 92 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 MSX2P35548 267 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 NUDT1P36639 197 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 GRM5P41594 1212 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 CASP3P42574 277 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 CLK3P49761 638 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 KCNQ4P56696 695 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 EIF2B5Q13144 721 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 MMRN1Q13201 1228 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 DNASE1L3Q13609 305 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 SNRNP35Q16560 246 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 CDONQ4KMG0 1287 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 DNAJC24Q6P3W2 148 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 RNF19BQ6ZMZ0 732 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 UNC5AQ6ZN44 842 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 CYP4V2Q6ZWL3 525 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 USP51Q70EK9 711 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 SPRED1Q7Z699 444 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 ZNF598Q86UK7 904 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 SLC22A16Q86VW1 577 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 MAPKAPK5Q8IW41 473 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 CLIP4Q8N3C7 705 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 DHRSXQ8N5I4 330 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 FAM71DQ8N9W8 422 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 SLC4A11Q8NBS3 891 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 BEST2Q8NFU1 509 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 ZSCAN18Q8TBC5 510 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 TAS1R2Q8TE23 839 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 LPGAT1Q92604 370 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 SLC45A3Q96JT2 553 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 OR52B2Q96RD2 323 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 ACO2Q99798 780 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 SH2D3AQ9BRG2 576 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 RUBCNLQ9H714 662 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 FANCEQ9HB96 536 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 CCDC177Q9NQR7 707 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 TOPORSQ9NS56 1045 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 ADA2Q9NZK5 511 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 IFT80Q9P2H3 777 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 TRPC5Q9UL62 973 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 SLC27A5Q9Y2P5 690 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 PCDHA11Q9Y5I1 949 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 NRAPQ86VF7 1730 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 ROBO1Q9Y6N7 1651 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 SLC15A5A6NIM6 579 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 SAGE2PA6NJ88 616 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 FAM86B1E9PN63 330 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 H0YAE9 185 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 MEIS2O14770 477 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 GABBR2O75899 941 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 TOMM70O94826 608 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 FAM86B2P0C5J1 330 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 FCGR1AP12314 374 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 CKMT2P17540 419 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 GARTP22102 1010 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 MMP8P22894 467 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 RPL10P27635 214 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 CD40LGP29965 261 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 GRK3P35626 688 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 NR4A2P43354 598 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 SLC26A2P50443 739 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 PRELPP51888 382 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 COPZ1P61923 177 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 GTF2BQ00403 316 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 IFITM3Q01628 133 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 KRR1Q13601 381 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 CBX2Q14781 532 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 HADHQ16836 314 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 SAMD4BQ5PRF9 694 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 CCNJQ5T5M9 372 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 SEL1L3Q68CR1 1132 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 BTLAQ7Z6A9 289 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 LRRC47Q8N1G4 583 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 CBR4Q8N4T8 237 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 RNF148Q8N7C7 305 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 ZNF781Q8N8C0 355 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 OR2T34Q8NGX1 318 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 OR2T3Q8NH03 318 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 MAPK15Q8TD08 544 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 RTP4Q96DX8 246 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 CEP295NLQ96MC4 621 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 CDK5RAP1Q96SZ6 601 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 EMILIN2Q9BXX0 1053 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 SEZ6LQ9BYH1 1024 aa9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 ILKAPQ9H0C8 392 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-207ENST00000469334 VPS33BQ9H267 617 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms