RNA–Protein interactions for RNA: ENST00000467853.5

PSMD6-204, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best)

Gene PSMD6, Length 4,583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-204ENST00000467853 SH3D19Q5HYK7 790 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 SAMD4BQ5PRF9 694 aaKnown RBP6.45□□□□□ -1.38
PSMD6-204ENST00000467853 PRMT9Q6P2P2 845 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 ARMCX2Q7L311 632 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 LPCAT2Q7L5N7 544 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 CMC1Q7Z7K0 106 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 ZFP28Q8NHY6 868 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 TMA16Q96EY4 203 aaKnown RBP6.45□□□□□ -1.38
PSMD6-204ENST00000467853 VPS39Q96JC1 886 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 SLC9A7Q96T83 725 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 PREBQ9HCU5 417 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 SETD4Q9NVD3 440 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 SLC39A10Q9ULF5 831 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 RUVBL2Q9Y230 463 aaKnown RBP6.45□□□□□ -1.38
PSMD6-204ENST00000467853 AKT3Q9Y243 479 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 PPP2R3BQ9Y5P8 575 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 PSAT1Q9Y617 370 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 KAT6AQ92794 2004 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 MFSD11O43934 449 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 SRP72O76094 671 aaKnown RBP6.45□□□□□ -1.38
PSMD6-204ENST00000467853 CD4P01730 458 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 LCP1P13796 627 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 MPSTP25325 297 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 PSMD8P48556 350 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 STX1BP61266 288 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 MYBPC1Q00872 1141 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 CDH17Q12864 832 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 NOL9Q5SY16 702 aaKnown RBP6.45□□□□□ -1.38
PSMD6-204ENST00000467853 TNS4Q8IZW8 715 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 ZNF567Q8N184 647 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 C7orf31Q8N865 590 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 OR52K1Q8NGK4 314 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 DUS3LQ96G46 650 aaKnown RBP6.45□□□□□ -1.38
PSMD6-204ENST00000467853 LGMNQ99538 433 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 GPR22Q99680 433 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 CLK4Q9HAZ1 481 aaKnown RBP6.45□□□□□ -1.38
PSMD6-204ENST00000467853 FAM49BQ9NUQ9 324 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 DNAAF2Q9NVR5 837 aaKnown RBP6.45□□□□□ -1.38
PSMD6-204ENST00000467853 HACL1Q9UJ83 578 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 BMP10O95393 424 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 PRKCGP05129 697 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 C8BP07358 591 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 HSPA1AP0DMV8 641 aaKnown RBP6.45□□□□□ -1.38
PSMD6-204ENST00000467853 HSPA1BP0DMV9 641 aaKnown RBP6.45□□□□□ -1.38
PSMD6-204ENST00000467853 SLC7A1P30825 629 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 HCAR3P49019 387 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 TMED1Q13445 227 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 INPP5AQ14642 412 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 TTLL4Q14679 1199 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 LPIN1Q14693 890 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 MYBPC3Q14896 1274 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 NBPF12Q5TAG4 269 aaPredicted RBP6.45□□□□□ -1.38
PSMD6-204ENST00000467853 GPR141Q7Z602 305 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 ZNF554Q86TJ5 538 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 PCYOX1LQ8NBM8 494 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 SLC7A14Q8TBB6 771 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 PIWIL1Q96J94 861 aaKnown RBP6.45□□□□□ -1.38
PSMD6-204ENST00000467853 PKP2Q99959 881 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 SLC25A23Q9BV35 468 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 RBM38Q9H0Z9 239 aaKnown RBP6.45□□□□□ -1.38
PSMD6-204ENST00000467853 CCDC68Q9H2F9 335 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 PRDM12Q9H4Q4 367 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 IARS2Q9NSE4 1012 aaKnown RBP6.45□□□□□ -1.38
PSMD6-204ENST00000467853 DDX18Q9NVP1 670 aaKnown RBP6.45□□□□□ -1.38
PSMD6-204ENST00000467853 MTMR10Q9NXD2 777 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 RRN3Q9NYV6 651 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 UBAP1Q9NZ09 502 aa6.45□□□□□ -1.38
PSMD6-204ENST00000467853 COL11A1P12107 1806 aaPredicted RBP6.44□□□□□ -1.38
PSMD6-204ENST00000467853 PYGLP06737 847 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 RPL34P49207 117 aaKnown RBP6.44□□□□□ -1.38
PSMD6-204ENST00000467853 CLCN3P51790 818 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 RHDQ02161 417 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 PPP2R5DQ14738 602 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 CYTH1Q15438 398 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 SPATS1Q496A3 300 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 RAB6CQ53S08 254 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 ARL13AQ5H913 290 aaPredicted RBP6.44□□□□□ -1.38
PSMD6-204ENST00000467853 C6orf52Q5T4I8 152 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 LBX2Q6XYB7 198 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 HACD2Q6Y1H2 254 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 CDR2LQ86X02 465 aaPredicted RBP6.44□□□□□ -1.38
PSMD6-204ENST00000467853 ERO1BQ86YB8 467 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 GOLM1Q8NBJ4 401 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 STYXQ8WUJ0 223 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 KHSRPQ92945 711 aaKnown RBP eCLIP6.44□□□□□ -1.385e-7■■■□□ 15.4
PSMD6-204ENST00000467853 FAM149B1Q96BN6 582 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 ZNF597Q96LX8 424 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 TMEM79Q9BSE2 394 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 RAB6CQ9H0N0 254 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 G3BP2Q9UN86 482 aaKnown RBP6.44□□□□□ -1.38
PSMD6-204ENST00000467853 AAR2Q9Y312 384 aaKnown RBP6.44□□□□□ -1.38
PSMD6-204ENST00000467853 USP3Q9Y6I4 520 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 STMN1P16949 149 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 EPHA3P29320 983 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 PKNOX1P55347 436 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 DNAJB13P59910 316 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 CEACAM7Q14002 265 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 LY6KQ17RY6 165 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 LRRC8EQ6NSJ5 796 aa6.44□□□□□ -1.38
PSMD6-204ENST00000467853 TMEM192Q8IY95 271 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms