RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 SRCP12931 536 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 TGM2P21980 687 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 ACADSBP45954 432 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 NUMBP49757 651 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 PDX1P52945 283 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 DAB2P98082 770 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 CENPCQ03188 943 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 LRRC63Q05C16 580 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 AUHQ13825 339 aaKnown RBP12.51□□□□□ -0.41
UBR4-211ENST00000467272 FZD2Q14332 565 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 TAF1BQ53T94 588 aaPredicted RBP12.51□□□□□ -0.41
UBR4-211ENST00000467272 BROXQ5VW32 411 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 TMC6Q7Z403 805 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 CLEC14AQ86T13 490 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 ARHGEF19Q8IW93 802 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 WDTC1Q8N5D0 677 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 FAM174AQ8TBP5 190 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 NAF1Q96HR8 494 aaKnown RBP12.51□□□□□ -0.41
UBR4-211ENST00000467272 NT5C1BQ96P26 610 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 TRIM62Q9BVG3 475 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 THAP9Q9H5L6 903 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 CLMPQ9H6B4 373 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 THSD1Q9NS62 852 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 KLF15Q9UIH9 416 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 CSNK1G3Q9Y6M4 447 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 SPTY2D1-AS1A0A0U1RR47 76 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 PMS2P1A4D2B8 440 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 TRIM49BA6NDI0 452 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 E5RJQ4 531 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 C1QTNF3-AMACRE9PGA6 284 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 RIOK3O14730 519 aaKnown RBP12.5□□□□□ -0.41
UBR4-211ENST00000467272 SLC31A1O15431 190 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 P4HA2O15460 535 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 KLK10O43240 276 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 EFSO43281 561 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 CSF2P04141 144 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 NME1P15531 152 aaKnown RBP12.5□□□□□ -0.41
UBR4-211ENST00000467272 HNRNPA2B1P22626 353 aaKnown RBP12.5□□□□□ -0.41
UBR4-211ENST00000467272 CLDN2P57739 230 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 POM121L1PQ3SYA9 428 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 RABGAP1LQ5R372 815 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 TPRG1LQ5T0D9 272 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 ZNF658Q5TYW1 1059 aaPredicted RBP12.5□□□□□ -0.41
UBR4-211ENST00000467272 OTUD1Q5VV17 481 aaPredicted RBP12.5□□□□□ -0.41
UBR4-211ENST00000467272 SEL1L3Q68CR1 1132 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 DCP2Q8IU60 420 aaKnown RBP12.5□□□□□ -0.41
UBR4-211ENST00000467272 ATP6V0D2Q8N8Y2 350 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 ZNF548Q8NEK5 533 aaPredicted RBP12.5□□□□□ -0.41
UBR4-211ENST00000467272 FAM149B1Q96BN6 582 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 SPATA32Q96LK8 384 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 KLF6Q99612 283 aaPredicted RBP12.5□□□□□ -0.41
UBR4-211ENST00000467272 DUSP23Q9BVJ7 150 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 FZD3Q9NPG1 666 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 SATB2Q9UPW6 733 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 ENTPD2Q9Y5L3 495 aa12.5□□□□□ -0.41
UBR4-211ENST00000467272 EME2A4GXA9 379 aaPredicted RBP12.49□□□□□ -0.41
UBR4-211ENST00000467272 POM121BA6NF01 834 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 K7ERQ8 282 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 CASC3O15234 703 aaKnown RBP12.49□□□□□ -0.41
UBR4-211ENST00000467272 RAD51BO15315 384 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 SMAD6O43541 496 aaKnown RBP12.49□□□□□ -0.41
UBR4-211ENST00000467272 CLDN11O75508 207 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 NEBLO76041 1014 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 WISP1O95388 367 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 GLI1P08151 1106 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 SLC2A3P11169 496 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 AKT2P31751 481 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 CCR1P32246 355 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 CHRNA3P32297 505 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 MLLT3P42568 568 aaPredicted RBP12.49□□□□□ -0.41
UBR4-211ENST00000467272 PNOCQ13519 176 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 ARL13BQ3SXY8 428 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 ZCCHC8Q6NZY4 707 aaKnown RBP12.49□□□□□ -0.41
UBR4-211ENST00000467272 FOXR2Q6PJQ5 311 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 KYAT3Q6YP21 454 aaKnown RBP12.49□□□□□ -0.41
UBR4-211ENST00000467272 Q6ZSR6 202 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 RRAGAQ7L523 313 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 C14orf80Q86SX3 495 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 PPM1KQ8N3J5 372 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 EHBP1Q8NDI1 1231 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 IFI44Q8TCB0 444 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 KLK6Q92876 244 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 ATXN7L3BQ96GX2 97 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 GSDMAQ96QA5 445 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 MED15Q96RN5 788 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 ANLNQ9NQW6 1124 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 ASNSD1Q9NWL6 643 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 ZNF212Q9UDV6 495 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 HS3ST4Q9Y661 456 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 WASF2Q9Y6W5 498 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 AHCTF1Q8WYP5 2266 aa12.49□□□□□ -0.41
UBR4-211ENST00000467272 NEMP2A6NFY4 417 aa12.48□□□□□ -0.41
UBR4-211ENST00000467272 DRGXA6NNA5 263 aa12.48□□□□□ -0.41
UBR4-211ENST00000467272 TPP1O14773 563 aa12.48□□□□□ -0.41
UBR4-211ENST00000467272 SPINT1O43278 529 aa12.48□□□□□ -0.41
UBR4-211ENST00000467272 TCEA3O75764 348 aa12.48□□□□□ -0.41
UBR4-211ENST00000467272 ALPPL2P10696 532 aa12.48□□□□□ -0.41
UBR4-211ENST00000467272 DUSP3P51452 185 aaPredicted RBP12.48□□□□□ -0.41
UBR4-211ENST00000467272 HNRNPKP61978 463 aaKnown RBP eCLIP12.48□□□□□ -0.41
UBR4-211ENST00000467272 KCNC4Q03721 635 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms