RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 C2CD4CQ8TF44 421 aa4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 TMEM174Q8WUU8 243 aa4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 AFG1LQ8WV93 481 aa4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 OIT3Q8WWZ8 545 aa4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 IP6K1Q92551 441 aa4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 LPAR1Q92633 364 aa4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 UBXN10Q96LJ8 280 aa4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 MYH16Q9H6N6 1097 aa4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 TLR8Q9NR97 1041 aaKnown RBP4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 TMEM160Q9NX00 188 aa4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 HDAC6Q9UBN7 1215 aa4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 CD207Q9UJ71 328 aa4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 UTS2RQ9UKP6 389 aa4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 H0YGN5 161 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 STX16-NPEPL1H3BU86 382 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 STX16O14662 325 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 ACOT8O14734 319 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 DHX16O60231 1041 aaKnown RBP4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 NEURL1O76050 574 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 MLH1P40692 756 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 CCT5P48643 541 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 RBM5P52756 815 aaKnown RBP eCLIP4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 LTBQ06643 244 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 ADCK5Q3MIX3 580 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 CBWD5Q5RIA9 395 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 MAP3K21Q5TCX8 1036 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 DDIASQ8IXT1 998 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 LINS1Q8NG48 757 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 RUBCNQ92622 972 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 CENPIQ92674 756 aaPredicted RBP4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 NEUROG1Q92886 237 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 MASTLQ96GX5 879 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 CLMNQ96JQ2 1002 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 ADAD1Q96M93 576 aaKnown RBP4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 SF3B5Q9BWJ5 86 aaKnown RBP4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 AAMDCQ9H7C9 122 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 GGA3Q9NZ52 723 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 PGAP2Q9UHJ9 254 aa4.84□□□□□ -1.63
PRPF40A-205ENST00000467114 CKAP5Q14008 2032 aa4.84□□□□□ -1.64
PRPF40A-205ENST00000467114 FGF3P11487 239 aaPredicted RBP4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 PKMP14618 531 aaKnown RBP4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 HOXA11P31270 313 aaPredicted RBP4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 RFX2P48378 723 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 EGR4Q05215 589 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 KEAP1Q14145 624 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 PLK5Q496M5 336 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 ZNF628Q5EBL2 1059 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 GORABQ5T7V8 394 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 SLC30A9Q6PML9 568 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 RBM23Q86U06 439 aaKnown RBP4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 C2CD5Q86YS7 1000 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 ANKRD18AQ8IVF6 992 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 TMEM57Q8N5G2 664 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 FSIP1Q8NA03 581 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 USP38Q8NB14 1042 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 NUDCD2Q8WVJ2 157 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 GOLGA1Q92805 767 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 MED30Q96HR3 178 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 CLSTN3Q9BQT9 956 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 PYM1Q9BRP8 204 aaKnown RBP4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 TASP1Q9H6P5 420 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 CD93Q9NPY3 652 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 THAP1Q9NVV9 213 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 WNT16Q9UBV4 365 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 KLQ9UEF7 1012 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 BAG5Q9UL15 447 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 LAMP3Q9UQV4 416 aa4.83□□□□□ -1.64
PRPF40A-205ENST00000467114 DPPA5A6NC42 116 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 VWA3AA6NCI4 1184 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 FAM90A7PA6NKC0 464 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 FAM90A22PA8MWA6 464 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 FAM90A12PA8MX19 464 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 FAM90A23PA8MXZ1 464 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 EIF3FO00303 357 aaPredicted RBP4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 MDM4O15151 490 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 SEPT4O43236 478 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 TYK2P29597 1187 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 KCNJ4P48050 445 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 CTXN3Q4LDR2 81 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 LRIG3Q6UXM1 1119 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 USP43Q70EL4 1123 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 GALNT7Q86SF2 657 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 LRRTM4Q86VH4 590 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 INPP5DQ92835 1189 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 COG8Q96MW5 612 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 REEP2Q9BRK0 252 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 PHF7Q9BWX1 381 aaPredicted RBP4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 CLPBQ9H078 707 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 PLK2Q9NYY3 685 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 FBXO4Q9UKT5 387 aa4.82□□□□□ -1.64
PRPF40A-205ENST00000467114 TRBV5-7A0A0A0MS05 114 aa4.81□□□□□ -1.64
PRPF40A-205ENST00000467114 RPS10-NUDT3A0A1W2PQS6 291 aa4.81□□□□□ -1.64
PRPF40A-205ENST00000467114 FOXO6A8MYZ6 492 aa4.81□□□□□ -1.64
PRPF40A-205ENST00000467114 RHODO00212 210 aa4.81□□□□□ -1.64
PRPF40A-205ENST00000467114 NCAM2O15394 837 aa4.81□□□□□ -1.64
PRPF40A-205ENST00000467114 MTNR1AP48039 350 aa4.81□□□□□ -1.64
PRPF40A-205ENST00000467114 PAPOLAP51003 745 aaKnown RBP4.81□□□□□ -1.64
PRPF40A-205ENST00000467114 GAD2Q05329 585 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms