RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 ADGRF1Q5T601 910 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 RUFY3Q7L099 469 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 KDELC2Q7Z4H8 507 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 SCD5Q86SK9 330 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 CCDC117Q8IWD4 279 aaPredicted RBP12.99□□□□□ -0.33
UBR4-210ENST00000466969 UNC5BQ8IZJ1 945 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 KYQ8NBH2 561 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 ZSWIM2Q8NEG5 633 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 SLC2A14Q8TDB8 520 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 OR8D1Q8WZ84 308 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 PMEPA1Q969W9 287 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 HDAC11Q96DB2 347 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 CDK5RAP3Q96JB5 506 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 TBATAQ96M53 351 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 PLIN2Q99541 437 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 ASPSCR1Q9BZE9 553 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 SLC13A1Q9BZW2 595 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.99□□□□□ -0.33
UBR4-210ENST00000466969 SARDHQ9UL12 918 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 OAS3Q9Y6K5 1087 aaKnown RBP12.99□□□□□ -0.33
UBR4-210ENST00000466969 NBEAL1Q6ZS30 2694 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 NYNRINQ9P2P1 1898 aaKnown RBP12.98□□□□□ -0.33
UBR4-210ENST00000466969 ANKUB1A6NFN9 424 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 M0QYT0 321 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 PCDH8O95206 1070 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 CBX6O95503 412 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 KRT18P05783 430 aaKnown RBP12.98□□□□□ -0.33
UBR4-210ENST00000466969 FAM200BP0CF97 657 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 CCDC130P13994 396 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 ZNF18P17022 549 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 TAS2R38P59533 333 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 ECT2LQ008S8 904 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 CCDC15Q0P6D6 951 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 ARHGAP44Q17R89 818 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 RD3Q7Z3Z2 195 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 PHACTR4Q8IZ21 702 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 RPL10LQ96L21 214 aaKnown RBP12.98□□□□□ -0.33
UBR4-210ENST00000466969 LRRC61Q9BV99 259 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 DDA1Q9BW61 102 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 TCEAL2Q9H3H9 227 aaPredicted RBP12.98□□□□□ -0.33
UBR4-210ENST00000466969 STIM2Q9P246 746 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 INTS6Q9UL03 887 aaKnown RBP12.98□□□□□ -0.33
UBR4-210ENST00000466969 NAALADL1Q9UQQ1 740 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 POLHQ9Y253 713 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 KIF3AQ9Y496 699 aa12.98□□□□□ -0.33
UBR4-210ENST00000466969 HGSO14964 777 aaPredicted RBP12.97□□□□□ -0.33
UBR4-210ENST00000466969 TBCAO75347 108 aaKnown RBP12.97□□□□□ -0.33
UBR4-210ENST00000466969 LRCH4O75427 683 aa12.97□□□□□ -0.33
UBR4-210ENST00000466969 FGF3P11487 239 aaPredicted RBP12.97□□□□□ -0.33
UBR4-210ENST00000466969 TSHRP16473 764 aa12.97□□□□□ -0.33
UBR4-210ENST00000466969 SGSHP51688 502 aa12.97□□□□□ -0.33
UBR4-210ENST00000466969 PGDP52209 483 aa12.97□□□□□ -0.33
UBR4-210ENST00000466969 EIF2B5Q13144 721 aaKnown RBP12.97□□□□□ -0.33
UBR4-210ENST00000466969 SURF1Q15526 300 aa12.97□□□□□ -0.33
UBR4-210ENST00000466969 TRIP4Q15650 581 aaPredicted RBP12.97□□□□□ -0.33
UBR4-210ENST00000466969 FAXCQ5TGI0 409 aa12.97□□□□□ -0.33
UBR4-210ENST00000466969 CCDC186Q7Z3E2 898 aa12.97□□□□□ -0.33
UBR4-210ENST00000466969 CDH24Q86UP0 819 aa12.97□□□□□ -0.33
UBR4-210ENST00000466969 GPBP1Q86WP2 473 aa12.97□□□□□ -0.33
UBR4-210ENST00000466969 GLIS1Q8NBF1 620 aa12.97□□□□□ -0.33
UBR4-210ENST00000466969 SPATA3Q8NHX4 192 aa12.97□□□□□ -0.33
UBR4-210ENST00000466969 FIBINQ8TAL6 211 aa12.97□□□□□ -0.33
UBR4-210ENST00000466969 ART4Q93070 314 aa12.97□□□□□ -0.33
UBR4-210ENST00000466969 FIZ1Q96SL8 496 aa12.97□□□□□ -0.33
UBR4-210ENST00000466969 MMTAG2Q9BU76 263 aaKnown RBP12.97□□□□□ -0.33
UBR4-210ENST00000466969 STOML2Q9UJZ1 356 aa12.97□□□□□ -0.33
UBR4-210ENST00000466969 PILRAQ9UKJ1 303 aa12.97□□□□□ -0.33
UBR4-210ENST00000466969 EXOC7Q9UPT5 735 aa12.97□□□□□ -0.33
UBR4-210ENST00000466969 DCHS2Q6V1P9 2916 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 TYW5A2RUC4 315 aaKnown RBP12.96□□□□□ -0.33
UBR4-210ENST00000466969 FPGTO14772 594 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 INPP4BO15327 924 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 CST3P01034 146 aaPredicted RBP12.96□□□□□ -0.33
UBR4-210ENST00000466969 VAV1P15498 845 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 CAPN3P20807 821 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 DDIT3P35638 169 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 PMS2P54278 862 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 ABHD18Q0P651 414 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 PITRM1Q5JRX3 1037 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 TRAPPC11Q7Z392 1133 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 ACOT1Q86TX2 421 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 PIM3Q86V86 326 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 C4orf32Q8N8J7 132 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 PCDH19Q8TAB3 1148 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 HVCN1Q96D96 273 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 LMLNQ96KR4 655 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 MDFIQ99750 246 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 CLPBQ9H078 707 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 ST6GALNAC4Q9H4F1 302 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 LUZP4Q9P127 313 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 APPL1Q9UKG1 709 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 GPR34Q9UPC5 381 aa12.96□□□□□ -0.33
UBR4-210ENST00000466969 PKDREJQ9NTG1 2253 aa12.96□□□□□ -0.34
UBR4-210ENST00000466969 TNRC6AQ8NDV7 1962 aaKnown RBP12.96□□□□□ -0.34
UBR4-210ENST00000466969 TMEM200CA6NKL6 621 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 HHLA1C9JL84 531 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 SPINT1O43278 529 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 CLSTN1O94985 981 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 LATS1O95835 1130 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 PAK4O96013 591 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms