RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 METAP1P53582 386 aa17.93■□□□□ 0.46
COL7A1-206ENST00000466591 NOMO3P69849 1222 aa17.93■□□□□ 0.46
COL7A1-206ENST00000466591 CDR2Q01850 454 aa17.93■□□□□ 0.46
COL7A1-206ENST00000466591 KRT31Q15323 416 aa17.93■□□□□ 0.46
COL7A1-206ENST00000466591 OTUD1Q5VV17 481 aaPredicted RBP17.93■□□□□ 0.46
COL7A1-206ENST00000466591 CCNI2Q6ZMN8 369 aaPredicted RBP17.93■□□□□ 0.46
COL7A1-206ENST00000466591 TRIM72Q6ZMU5 477 aa17.93■□□□□ 0.46
COL7A1-206ENST00000466591 DBX2Q6ZNG2 339 aa17.93■□□□□ 0.46
COL7A1-206ENST00000466591 EID2Q8N6I1 236 aa17.93■□□□□ 0.46
COL7A1-206ENST00000466591 EMC1Q8N766 993 aa17.93■□□□□ 0.46
COL7A1-206ENST00000466591 MFSD2AQ8NA29 543 aa17.93■□□□□ 0.46
COL7A1-206ENST00000466591 BAHD1Q8TBE0 780 aaPredicted RBP17.93■□□□□ 0.46
COL7A1-206ENST00000466591 SLC20A1Q8WUM9 679 aa17.93■□□□□ 0.46
COL7A1-206ENST00000466591 ALG14Q96F25 216 aa17.93■□□□□ 0.46
COL7A1-206ENST00000466591 HAPLN3Q96S86 360 aa17.93■□□□□ 0.46
COL7A1-206ENST00000466591 C11orf70Q9BRQ4 267 aa17.93■□□□□ 0.46
COL7A1-206ENST00000466591 NAA15Q9BXJ9 866 aaKnown RBP17.93■□□□□ 0.46
COL7A1-206ENST00000466591 TNKS2Q9H2K2 1166 aa17.93■□□□□ 0.46
COL7A1-206ENST00000466591 EBF2Q9HAK2 575 aa17.93■□□□□ 0.46
COL7A1-206ENST00000466591 TMPRSS4Q9NRS4 437 aa17.93■□□□□ 0.46
COL7A1-206ENST00000466591 IL36AQ9UHA7 158 aa17.93■□□□□ 0.46
COL7A1-206ENST00000466591 HPCAL4Q9UM19 191 aa17.93■□□□□ 0.46
COL7A1-206ENST00000466591 KMT2BQ9UMN6 2715 aaPredicted RBP17.92■□□□□ 0.46
COL7A1-206ENST00000466591 A0A0D9SEW6 157 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 K7ERQ8 282 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 ENC1O14682 589 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 SLC31A1O15431 190 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 MT-CO1P00395 513 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 WNT1P04628 370 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 AKT2P31751 481 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 HNF1BP35680 557 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 ETFBP38117 255 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 NXPH1P58417 271 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 C5orf22Q49AR2 442 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 AGBL4Q5VU57 503 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 C22orf39Q6P5X5 142 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 DHRS13Q6UX07 377 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 ZNF783Q6ZMS7 281 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 TMPRSS7Q7RTY8 843 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 TRIM69Q86WT6 500 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 OR7D4Q8NG98 312 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 NT5C3BQ969T7 300 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 KLHDC7BQ96G42 594 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 SELENOOQ9BVL4 669 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 ANO10Q9NW15 660 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 DAAM1Q9Y4D1 1078 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 OR51B4Q9Y5P0 310 aa17.92■□□□□ 0.46
COL7A1-206ENST00000466591 A0A1W2PQU0 124 aa17.91■□□□□ 0.46
COL7A1-206ENST00000466591 ILVBLA1L0T0 632 aa17.91■□□□□ 0.46
COL7A1-206ENST00000466591 DRGXA6NNA5 263 aa17.91■□□□□ 0.46
COL7A1-206ENST00000466591 WNT9AO14904 365 aa17.91■□□□□ 0.46
COL7A1-206ENST00000466591 LATO43561 262 aa17.91■□□□□ 0.46
COL7A1-206ENST00000466591 EPHA8P29322 1005 aaPredicted RBP17.91■□□□□ 0.46
COL7A1-206ENST00000466591 KLK7P49862 253 aa17.91■□□□□ 0.46
COL7A1-206ENST00000466591 UBXN1Q04323 297 aa17.91■□□□□ 0.46
COL7A1-206ENST00000466591 OVGP1Q12889 678 aa17.91■□□□□ 0.46
COL7A1-206ENST00000466591 ARSIQ5FYB1 569 aa17.91■□□□□ 0.46
COL7A1-206ENST00000466591 FBXL19Q6PCT2 694 aa17.91■□□□□ 0.46
COL7A1-206ENST00000466591 IQCHQ86VS3 1027 aa17.91■□□□□ 0.46
COL7A1-206ENST00000466591 OR2A12Q8NGT7 310 aa17.91■□□□□ 0.46
COL7A1-206ENST00000466591 SLC30A5Q8TAD4 765 aa17.91■□□□□ 0.46
COL7A1-206ENST00000466591 RXFP2Q8WXD0 754 aa17.91■□□□□ 0.46
COL7A1-206ENST00000466591 KLK6Q92876 244 aa17.91■□□□□ 0.46
COL7A1-206ENST00000466591 PSMB7Q99436 277 aa17.91■□□□□ 0.46
COL7A1-206ENST00000466591 ANLNQ9NQW6 1124 aa17.91■□□□□ 0.46
COL7A1-206ENST00000466591 RALYQ9UKM9 306 aaKnown RBP17.91■□□□□ 0.46
COL7A1-206ENST00000466591 USP24Q9UPU5 2620 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 A0A1W2PR77 199 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 FAM149AA5PLN7 773 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 NEMP1O14524 444 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 JUPP14923 745 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 PRLRP16471 622 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 GEMIN4P57678 1058 aaKnown RBP17.9■□□□□ 0.46
COL7A1-206ENST00000466591 GNA12Q03113 381 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 SLC20A2Q08357 652 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 MAPK8IP2Q13387 824 aaPredicted RBP17.9■□□□□ 0.46
COL7A1-206ENST00000466591 POLD3Q15054 466 aaPredicted RBP17.9■□□□□ 0.46
COL7A1-206ENST00000466591 STX1AQ16623 288 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 NEK5Q6P3R8 708 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 ERN2Q76MJ5 926 aaKnown RBP17.9■□□□□ 0.46
COL7A1-206ENST00000466591 PROSER1Q86XN7 944 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 TMIEQ8NEW7 156 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 MDM1Q8TC05 714 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 CALN1Q9BXU9 219 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 GANQ9H2C0 597 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 ZDHHC6Q9H6R6 413 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 ERVMER34-1Q9H9K5 563 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 LMBRD1Q9NUN5 540 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 FANCLQ9NW38 375 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 ADAM22Q9P0K1 906 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 OR12D3Q9UGF7 316 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 TMEM59LQ9UK28 342 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 LHX6Q9UPM6 363 aa17.9■□□□□ 0.46
COL7A1-206ENST00000466591 IGLV3-10A0A075B6K4 115 aa17.89■□□□□ 0.45
COL7A1-206ENST00000466591 SMAD6O43541 496 aaKnown RBP17.89■□□□□ 0.45
COL7A1-206ENST00000466591 SDC3O75056 442 aa17.89■□□□□ 0.45
COL7A1-206ENST00000466591 RFPL3O75679 317 aa17.89■□□□□ 0.45
COL7A1-206ENST00000466591 CCDC172P0C7W6 258 aa17.89■□□□□ 0.45
COL7A1-206ENST00000466591 THEGLP0DJG4 465 aa17.89■□□□□ 0.45
COL7A1-206ENST00000466591 CDK4P11802 303 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms