RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 LAMA5O15230 3695 aa19.63■□□□□ 0.73
COL9A3-206ENST00000466532 TRABD2BA6NFA1 517 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 DRGXA6NNA5 263 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 E9PAM4 449 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 GOLGA8SH3BPF8 625 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 K7ERQ8 282 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 MAGEC1O60732 1142 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 CTSLP07711 333 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 UCHL3P15374 230 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 RRM1P23921 792 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 FLT3P36888 993 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 BNIP3Q12983 259 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 DNAJC3Q13217 504 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 STAT4Q14765 748 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 SETMARQ53H47 684 aaPredicted RBP19.62■□□□□ 0.73
COL9A3-206ENST00000466532 C6orf118Q5T5N4 469 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 C19orf48Q6RUI8 117 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 NOP9Q86U38 636 aaKnown RBP19.62■□□□□ 0.73
COL9A3-206ENST00000466532 IQCHQ86VS3 1027 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 DCAF4L2Q8NA75 395 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 MSANTD4Q8NCY6 345 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 C1orf74Q96LT6 269 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 PREBQ9HCU5 417 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 TMEM51Q9NW97 253 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 GPSM3Q9Y4H4 160 aa19.62■□□□□ 0.73
COL9A3-206ENST00000466532 CACNA1GO43497 2377 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 APC2O95996 2303 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 A0A0D9SEW6 157 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 PRAMEF26H0Y7S4 382 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 KPNA3O00505 521 aaPredicted RBP19.61■□□□□ 0.73
COL9A3-206ENST00000466532 SMAD6O43541 496 aaKnown RBP19.61■□□□□ 0.73
COL9A3-206ENST00000466532 RNGTTO60942 597 aaKnown RBP19.61■□□□□ 0.73
COL9A3-206ENST00000466532 SRGAP2O75044 1071 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 LSM8O95777 96 aaKnown RBP19.61■□□□□ 0.73
COL9A3-206ENST00000466532 MMEP08473 750 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 OR1E1P30953 314 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 CHRNA3P32297 505 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 RXRGP48443 463 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 TAS2R38P59533 333 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 CAMK2BQ13554 666 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 TCP11X2Q5H9J9 407 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 ACBD5Q5T8D3 534 aaPredicted RBP19.61■□□□□ 0.73
COL9A3-206ENST00000466532 PIP5KL1Q5T9C9 394 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 TRNP1Q6NT89 227 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 LINGO4Q6UY18 593 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 OR2A12Q8NGT7 310 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 CFAP57Q96MR6 1250 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 STK33Q9BYT3 514 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 DKK4Q9UBT3 224 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 RAXQ9Y2V3 346 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 PCDHGA1Q9Y5H4 931 aa19.61■□□□□ 0.73
COL9A3-206ENST00000466532 KNTC1P50748 2209 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 IGLV3-10A0A075B6K4 115 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 F8VZ95 297 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 RFPL3O75679 317 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 GLDCP23378 1020 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 EEF1GP26641 437 aaKnown RBP19.6■□□□□ 0.73
COL9A3-206ENST00000466532 CLCN6P51797 869 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 NOMO3P69849 1222 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 CYP4F3Q08477 520 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 CCDC15Q0P6D6 951 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 OVGP1Q12889 678 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 C22orf39Q6P5X5 142 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 TMPRSS12Q86WS5 348 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 PDCD7Q8N8D1 485 aaKnown RBP19.6■□□□□ 0.73
COL9A3-206ENST00000466532 CHST14Q8NCH0 376 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 TMIEQ8NEW7 156 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 OR7D4Q8NG98 312 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 EPS8L1Q8TE68 723 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 CPA5Q8WXQ8 436 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 ARRDC3Q96B67 414 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 HAPLN3Q96S86 360 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 DYRK4Q9NR20 520 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 TAB2Q9NYJ8 693 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 TMEM59LQ9UK28 342 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 CA5BQ9Y2D0 317 aa19.6■□□□□ 0.73
COL9A3-206ENST00000466532 A0A1W2PQU0 124 aa19.59■□□□□ 0.73
COL9A3-206ENST00000466532 SLC31A1O15431 190 aa19.59■□□□□ 0.73
COL9A3-206ENST00000466532 PRNPP04156 253 aa19.59■□□□□ 0.73
COL9A3-206ENST00000466532 C1SP09871 688 aa19.59■□□□□ 0.73
COL9A3-206ENST00000466532 HOXB3P14651 431 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-206ENST00000466532 ACADVLP49748 655 aa19.59■□□□□ 0.73
COL9A3-206ENST00000466532 SFMBT2Q5VUG0 894 aa19.59■□□□□ 0.73
COL9A3-206ENST00000466532 NAA35Q5VZE5 725 aa19.59■□□□□ 0.73
COL9A3-206ENST00000466532 BNIPLQ7Z465 357 aa19.59■□□□□ 0.73
COL9A3-206ENST00000466532 FAM131BQ86XD5 332 aa19.59■□□□□ 0.73
COL9A3-206ENST00000466532 GRIN3AQ8TCU5 1115 aa19.59■□□□□ 0.73
COL9A3-206ENST00000466532 KLK6Q92876 244 aa19.59■□□□□ 0.73
COL9A3-206ENST00000466532 KLHDC7BQ96G42 594 aa19.59■□□□□ 0.73
COL9A3-206ENST00000466532 MYOCQ99972 504 aa19.59■□□□□ 0.73
COL9A3-206ENST00000466532 SPON2Q9BUD6 331 aa19.59■□□□□ 0.73
COL9A3-206ENST00000466532 TNKS2Q9H2K2 1166 aa19.59■□□□□ 0.73
COL9A3-206ENST00000466532 METTL5Q9NRN9 209 aaKnown RBP19.59■□□□□ 0.73
COL9A3-206ENST00000466532 IL36AQ9UHA7 158 aa19.59■□□□□ 0.73
COL9A3-206ENST00000466532 URB1O60287 2271 aaKnown RBP19.58■□□□□ 0.73
COL9A3-206ENST00000466532 ILVBLA1L0T0 632 aa19.58■□□□□ 0.72
COL9A3-206ENST00000466532 RNF103O00237 685 aa19.58■□□□□ 0.72
COL9A3-206ENST00000466532 CDK4P11802 303 aa19.58■□□□□ 0.72
COL9A3-206ENST00000466532 PRLRP16471 622 aa19.58■□□□□ 0.72
COL9A3-206ENST00000466532 HNF1BP35680 557 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms