RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 TRIM58Q8NG06 486 aa8.87□□□□□ -0.99
DDR1-242ENST00000465966 CPA5Q8WXQ8 436 aa8.87□□□□□ -0.99
DDR1-242ENST00000465966 SLC6A18Q96N87 628 aa8.87□□□□□ -0.99
DDR1-242ENST00000465966 NOX5Q96PH1 765 aa8.87□□□□□ -0.99
DDR1-242ENST00000465966 ALS2CR12Q96Q35 445 aa8.87□□□□□ -0.99
DDR1-242ENST00000465966 LGMNQ99538 433 aa8.87□□□□□ -0.99
DDR1-242ENST00000465966 NAPGQ99747 312 aaPredicted RBP8.87□□□□□ -0.99
DDR1-242ENST00000465966 C11orf70Q9BRQ4 267 aa8.87□□□□□ -0.99
DDR1-242ENST00000465966 UBXN6Q9BZV1 441 aa8.87□□□□□ -0.99
DDR1-242ENST00000465966 GOLPH3Q9H4A6 298 aa8.87□□□□□ -0.99
DDR1-242ENST00000465966 OLA1Q9NTK5 396 aaKnown RBP8.87□□□□□ -0.99
DDR1-242ENST00000465966 ABCB8Q9NUT2 735 aa8.87□□□□□ -0.99
DDR1-242ENST00000465966 FBXL12Q9NXK8 326 aa8.87□□□□□ -0.99
DDR1-242ENST00000465966 CLCA2Q9UQC9 943 aa8.87□□□□□ -0.99
DDR1-242ENST00000465966 PLXNB3Q9ULL4 1909 aa8.87□□□□□ -0.99
DDR1-242ENST00000465966 LOC400499M0QZD8 3231 aa8.87□□□□□ -0.99
DDR1-242ENST00000465966 ACACAQ13085 2346 aa8.87□□□□□ -0.99
DDR1-242ENST00000465966 CTAGE9A4FU28 777 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 M0QYV0 167 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 CBX4O00257 560 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 PALMO75781 387 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 RNASEH2AO75792 299 aaKnown RBP8.86□□□□□ -0.99
DDR1-242ENST00000465966 LSM8O95777 96 aaKnown RBP8.86□□□□□ -0.99
DDR1-242ENST00000465966 FTCDO95954 541 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 CYP1A2P05177 515 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 IGHV4-34P06331 123 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 VDRP11473 427 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 NSFP46459 744 aaKnown RBP8.86□□□□□ -0.99
DDR1-242ENST00000465966 CLDN6P56747 220 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 TMPRSS3P57727 454 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 E2F1Q01094 437 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 PTP4A2Q12974 167 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 TCEAL1Q15170 157 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 TRIP4Q15650 581 aaPredicted RBP8.86□□□□□ -0.99
DDR1-242ENST00000465966 GOLGA7BQ2TAP0 167 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 TBC1D25Q3MII6 688 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 C2CD6Q53TS8 623 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 SGO2Q562F6 1265 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 ADGRF1Q5T601 910 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 FBXL19Q6PCT2 694 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 NCEH1Q6PIU2 408 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 MMS22LQ6ZRQ5 1243 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 ADIPOR2Q86V24 386 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 PHF13Q86YI8 300 aaPredicted RBP8.86□□□□□ -0.99
DDR1-242ENST00000465966 CCDC117Q8IWD4 279 aaPredicted RBP8.86□□□□□ -0.99
DDR1-242ENST00000465966 SPACA3Q8IXA5 215 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 MCOLN2Q8IZK6 566 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 WDTC1Q8N5D0 677 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 RNF10Q8N5U6 811 aaKnown RBP8.86□□□□□ -0.99
DDR1-242ENST00000465966 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.86□□□□□ -0.99
DDR1-242ENST00000465966 LRRC57Q8N9N7 239 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 ZNF248Q8NDW4 579 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 TPCN2Q8NHX9 752 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 RNF139Q8WU17 664 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 TSC1Q92574 1164 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 WBP1Q96G27 269 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 HEXIM2Q96MH2 286 aaKnown RBP8.86□□□□□ -0.99
DDR1-242ENST00000465966 OMDQ99983 421 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 ORAI3Q9BRQ5 295 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 RSPH9Q9H1X1 276 aaPredicted RBP8.86□□□□□ -0.99
DDR1-242ENST00000465966 PDCL3Q9H2J4 239 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 PABPC3Q9H361 631 aaKnown RBP8.86□□□□□ -0.99
DDR1-242ENST00000465966 L2HGDHQ9H9P8 463 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 CYTH4Q9UIA0 394 aa8.86□□□□□ -0.99
DDR1-242ENST00000465966 TLR4O00206 839 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 RIOK3O14730 519 aaKnown RBP8.85□□□□□ -0.99
DDR1-242ENST00000465966 MED7O43513 233 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 MAGEC1O60732 1142 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 URI1O94763 535 aaPredicted RBP8.85□□□□□ -0.99
DDR1-242ENST00000465966 MTA2O94776 668 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 LATS1O95835 1130 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 ZBED1O96006 694 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 MMP8P22894 467 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 RRM1P23921 792 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 EPHA8P29322 1005 aaPredicted RBP8.85□□□□□ -0.99
DDR1-242ENST00000465966 CCR5P51681 352 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 HADHBP55084 474 aaKnown RBP8.85□□□□□ -0.99
DDR1-242ENST00000465966 NAP1L1P55209 391 aaKnown RBP8.85□□□□□ -0.99
DDR1-242ENST00000465966 PCBP4P57723 403 aaKnown RBP8.85□□□□□ -0.99
DDR1-242ENST00000465966 C1QBPQ07021 282 aaKnown RBP8.85□□□□□ -0.99
DDR1-242ENST00000465966 CST6Q15828 149 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 PTPN20Q4JDL3 420 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 MPP7Q5T2T1 576 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 PPP1R26Q5T8A7 1209 aaPredicted RBP8.85□□□□□ -0.99
DDR1-242ENST00000465966 KIAA0907Q7Z7F0 614 aaPredicted RBP8.85□□□□□ -0.99
DDR1-242ENST00000465966 LSMEM2Q8N112 164 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 TMEM35BQ8NCS4 154 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 OR2T34Q8NGX1 318 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 SLC35G2Q8TBE7 412 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 ZNF564Q8TBZ8 553 aaPredicted RBP8.85□□□□□ -0.99
DDR1-242ENST00000465966 TRIM11Q96F44 468 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 SERAC1Q96JX3 654 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 ZNF578Q96N58 590 aaPredicted RBP8.85□□□□□ -0.99
DDR1-242ENST00000465966 NUP85Q9BW27 656 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 NEUROG2Q9H2A3 272 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 CLMPQ9H6B4 373 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 ERVMER34-1Q9H9K5 563 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 CTTNBP2NLQ9P2B4 639 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 TJP2Q9UDY2 1190 aa8.85□□□□□ -0.99
DDR1-242ENST00000465966 CNOT8Q9UFF9 292 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms